Difference between revisions of "TSS:Hg 100212.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=47 |entrez_id=55958 |gc_percent=0.681592 |gene_alias=- |gene_description=kelch like family member 9 |gene_name=KLHL9 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000359039.4:0 uc003zoy.4:0 AY172949:0 AB037775:0 AL713669:0 BC039133:0 AK091715:0 BC064958:5 NM_018847:-18 BX538121:117 BC113513:462 BC105008:462 KJ899219:498 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=47 | |distance_to_tss=47 | ||
| + | |end=21335412 | ||
|entrez_id=55958 | |entrez_id=55958 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=kelch like family member 9 | |gene_description=kelch like family member 9 | ||
| − | |gene_name=KLHL9 | + | |gene_id=55958 |
| + | |gene_name=kelch like family member 9 | ||
| + | |gene_source=HGNC:18732 | ||
| + | |gene_symbol=KLHL9 | ||
| + | |gene_synonyms=FLJ13568 KIAA1354 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18732 | ||
|nearest_ensembl=ENSG00000198642 | |nearest_ensembl=ENSG00000198642 | ||
|nearest_promoter_id=NM_018847 | |nearest_promoter_id=NM_018847 | ||
|nearest_refseq=NM_018847 | |nearest_refseq=NM_018847 | ||
|nearest_unigene=Hs.701778 | |nearest_unigene=Hs.701778 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=21335357 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000359039.4 uc003zoy.4 AY172949 AB037775 AL713669 BC039133 AK091715 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100212.1 | |tss_id=hg_100212.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q58EZ4 Q5JC44 Q9P2J3 | ||
}} | }} | ||
Revision as of 17:03, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000359039.4 uc003zoy.4 AY172949 AB037775 AL713669 BC039133 AK091715 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000359039.4:0 uc003zoy.4:0 AY172949:0 AB037775:0 AL713669:0 BC039133:0 AK091715:0 BC064958:5 NM_018847:-18 BX538121:117 BC113513:462 BC105008:462 KJ899219:498 |
TATA-Box annotation
| Distance to TSS: | 47 |
|---|---|
| Nearest PromoterID: | NM_018847 |
| Entrez ID: | 55958 |
| Nearest Unigene: | Hs.701778 |
| Nearest Refseq: | NM_018847 |
| Nearest Ensembl: | ENSG00000198642 |
| Gene Name: | kelch like family member 9 |
| Gene Alias: | - |
| Gene Description: | kelch like family member 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
