Difference between revisions of "TSS:Hg 100473.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-169 |entrez_id=360 |gc_percent=0.671642 |gene_alias=AQP-3|GIL |gene_description=aquaporin 3 (Gill blood group) |gene_name=AQP3...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GIL= | ||
| + | |all_trans=NM_004925:167 NM_001318144:167 ENST00000297991.4:189 uc003zsx.4:189 ENST00000493581.1:204 uc064spr.1:204 AK095363:204 AK292208:207 AK315760:207 AK303206:207 ENST00000463983.5:218 uc064spt.1:218 AB001325:227 BC013566:233 AJ493597:247 KJ890695:269 CR541991:270 BT007199:270 CR542025:270 ENST00000473153.1:291 uc064spu.1:291 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=167 | ||
|distance_to_tss=-169 | |distance_to_tss=-169 | ||
| + | |end=33447804 | ||
|entrez_id=360 | |entrez_id=360 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=AQP-3|GIL | |gene_alias=AQP-3|GIL | ||
|gene_description=aquaporin 3 (Gill blood group) | |gene_description=aquaporin 3 (Gill blood group) | ||
| − | |gene_name=AQP3 | + | |gene_id=360 |
| + | |gene_name=aquaporin 3 (Gill blood group) | ||
| + | |gene_source=HGNC:636 | ||
| + | |gene_symbol=AQP3 | ||
| + | |gene_synonyms=GIL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:636 | ||
|nearest_ensembl=ENSG00000165272 | |nearest_ensembl=ENSG00000165272 | ||
|nearest_promoter_id=NM_001318144 | |nearest_promoter_id=NM_001318144 | ||
|nearest_refseq=NM_004925 | |nearest_refseq=NM_004925 | ||
|nearest_unigene=Hs.234642 | |nearest_unigene=Hs.234642 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=33447799 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_004925 NM_001318144 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100473.1 | |tss_id=hg_100473.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q92482 | ||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_004925 NM_001318144 |
|---|---|
| Distance: | 167 |
| Num_trans: | 21 |
| All_trans: | NM_004925:167 NM_001318144:167 ENST00000297991.4:189 uc003zsx.4:189 ENST00000493581.1:204 uc064spr.1:204 AK095363:204 AK292208:207 AK315760:207 AK303206:207 ENST00000463983.5:218 uc064spt.1:218 AB001325:227 BC013566:233 AJ493597:247 KJ890695:269 CR541991:270 BT007199:270 CR542025:270 ENST00000473153.1:291 uc064spu.1:291 |
TATA-Box annotation
| Distance to TSS: | -169 |
|---|---|
| Nearest PromoterID: | NM_001318144 |
| Entrez ID: | 360 |
| Nearest Unigene: | Hs.234642 |
| Nearest Refseq: | NM_004925 |
| Nearest Ensembl: | ENSG00000165272 |
| Gene Name: | aquaporin 3 (Gill blood group) |
| Gene Alias: | AQP-3 |
| Gene Description: | aquaporin 3 (Gill blood group) |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
