Difference between revisions of "TSS:Hg 101039.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=168 |entrez_id=55312 |gc_percent=0.731343 |gene_alias=RIFK |gene_description=riboflavin kinase |gene_name=RFK |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC015473:2 BC007069:-53 ENST00000376736.5:-136 uc004akd.3:-136 AK002011:-136 ENST00000472900.5:-148 ENST00000479197.1:-148 uc064tuj.1:-148 uc064tuk.1:-148 AK315734:-148 AK307079:-148 NM_018339:-159 KJ899117:159 KJ905495:159 ENST00000490113.1:220 uc064tug.1:220 ENST00000483155.5:395 uc064tuh.1:395 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=2 | ||
|distance_to_tss=168 | |distance_to_tss=168 | ||
| + | |end=76394369 | ||
|entrez_id=55312 | |entrez_id=55312 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_018339 | |nearest_refseq=NM_018339 | ||
|nearest_unigene=Hs.37558 | |nearest_unigene=Hs.37558 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=76394351 | ||
| + | |strand=- | ||
| + | |transcript_name=BC015473 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101039.1 | |tss_id=hg_101039.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:26, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC015473 |
|---|---|
| Distance: | 2 |
| Num_trans: | 18 |
| All_trans: | BC015473:2 BC007069:-53 ENST00000376736.5:-136 uc004akd.3:-136 AK002011:-136 ENST00000472900.5:-148 ENST00000479197.1:-148 uc064tuj.1:-148 uc064tuk.1:-148 AK315734:-148 AK307079:-148 NM_018339:-159 KJ899117:159 KJ905495:159 ENST00000490113.1:220 uc064tug.1:220 ENST00000483155.5:395 uc064tuh.1:395 |
TATA-Box annotation
| Distance to TSS: | 168 |
|---|---|
| Nearest PromoterID: | NM_018339 |
| Entrez ID: | 55312 |
| Nearest Unigene: | Hs.37558 |
| Nearest Refseq: | NM_018339 |
| Nearest Ensembl: | ENSG00000135002 |
| Gene Name: | RFK |
| Gene Alias: | RIFK |
| Gene Description: | riboflavin kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
