Difference between revisions of "TSS:Hg 101112.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=63324 |entrez_id=101927477 |gc_percent=0.447761 |gene_alias=XLOC_000303 |gene_description=long intergenic non-protein coding RNA 15...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=DQ598624:221 DQ582191:-272 DQ590344:-303 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=221 | ||
|distance_to_tss=63324 | |distance_to_tss=63324 | ||
| + | |end=79887865 | ||
|entrez_id=101927477 | |entrez_id=101927477 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_121212 | |nearest_refseq=NR_121212 | ||
|nearest_unigene=Hs.571630 | |nearest_unigene=Hs.571630 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=79887842 | ||
| + | |strand=- | ||
| + | |transcript_name=DQ598624 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101112.1 | |tss_id=hg_101112.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:29, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | DQ598624 |
|---|---|
| Distance: | 221 |
| Num_trans: | 3 |
| All_trans: | DQ598624:221 DQ582191:-272 DQ590344:-303 |
TATA-Box annotation
| Distance to TSS: | 63324 |
|---|---|
| Nearest PromoterID: | NR_121213 |
| Entrez ID: | 101927477 |
| Nearest Unigene: | Hs.571630 |
| Nearest Refseq: | NR_121212 |
| Nearest Ensembl: | |
| Gene Name: | LINC01507 |
| Gene Alias: | XLOC_000303 |
| Gene Description: | long intergenic non-protein coding RNA 1507 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
