Difference between revisions of "TSS:Hg 101138.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=67 |entrez_id=257019 |gc_percent=0.766169 |gene_alias=4.1O|EPB41L4O|EPB41LO|P410 |gene_description=FERM domain containing 3 |ge...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |EPB41L4O= | ||
| + | |EPB41LO= | ||
| + | |P410= | ||
| + | |all_trans=AK297722:0 AK223597:0 NM_001244959:-5 NM_174938:-5 ENST00000304195.7:-10 uc004ams.3:-10 BC041376:-10 EF560742:20 ENST00000376438.5:-118 uc004amr.2:-118 KJ904084:122 AK094281:170 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=0 | ||
|distance_to_tss=67 | |distance_to_tss=67 | ||
| + | |end=83538428 | ||
|entrez_id=257019 | |entrez_id=257019 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=4.1O|EPB41L4O|EPB41LO|P410 | |gene_alias=4.1O|EPB41L4O|EPB41LO|P410 | ||
|gene_description=FERM domain containing 3 | |gene_description=FERM domain containing 3 | ||
| − | |gene_name=FRMD3 | + | |gene_id=257019 |
| + | |gene_name=FERM domain containing 3 | ||
| + | |gene_source=HGNC:24125 | ||
| + | |gene_symbol=FRMD3 | ||
| + | |gene_synonyms=EPB41L4O MGC20553 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:24125 | ||
|nearest_ensembl=ENSG00000172159 | |nearest_ensembl=ENSG00000172159 | ||
|nearest_promoter_id=NM_001244959 | |nearest_promoter_id=NM_001244959 | ||
|nearest_refseq=NM_174938 | |nearest_refseq=NM_174938 | ||
|nearest_unigene=Hs.127535 | |nearest_unigene=Hs.127535 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=83538303 | ||
| + | |strand=- | ||
| + | |transcript_name=AK297722 AK223597 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101138.1 | |tss_id=hg_101138.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK297722 AK223597 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | AK297722:0 AK223597:0 NM_001244959:-5 NM_174938:-5 ENST00000304195.7:-10 uc004ams.3:-10 BC041376:-10 EF560742:20 ENST00000376438.5:-118 uc004amr.2:-118 KJ904084:122 AK094281:170 |
TATA-Box annotation
| Distance to TSS: | 67 |
|---|---|
| Nearest PromoterID: | NM_001244959 |
| Entrez ID: | 257019 |
| Nearest Unigene: | Hs.127535 |
| Nearest Refseq: | NM_174938 |
| Nearest Ensembl: | ENSG00000172159 |
| Gene Name: | FERM domain containing 3 |
| Gene Alias: | 4.1O |
| Gene Description: | FERM domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
