Difference between revisions of "TSS:Hg 101917.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=595 |entrez_id=401546 |gc_percent=0.636816 |gene_alias=bA470J20.2 |gene_description=chromosome 9 open reading frame 152 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC110807:0 BX648492:0 BX648620:0 AK290278:0 EU832457:0 EU832539:0 EU446686:0 ENST00000473442.1:34 uc064vab.1:34 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=0 | ||
|distance_to_tss=595 | |distance_to_tss=595 | ||
| + | |end=110207562 | ||
|entrez_id=401546 | |entrez_id=401546 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=bA470J20.2 | |gene_alias=bA470J20.2 | ||
|gene_description=chromosome 9 open reading frame 152 | |gene_description=chromosome 9 open reading frame 152 | ||
| − | |gene_name=C9orf152 | + | |gene_id=401546 |
| + | |gene_name=chromosome 9 open reading frame 152 | ||
| + | |gene_source=HGNC:31455 | ||
| + | |gene_symbol=C9orf152 | ||
| + | |gene_synonyms=bA470J20.2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31455 | ||
|nearest_ensembl=ENSG00000188959 | |nearest_ensembl=ENSG00000188959 | ||
|nearest_promoter_id=NM_001012993 | |nearest_promoter_id=NM_001012993 | ||
|nearest_refseq=NM_001012993 | |nearest_refseq=NM_001012993 | ||
|nearest_unigene=Hs.125608 | |nearest_unigene=Hs.125608 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=110207513 | ||
| + | |strand=- | ||
| + | |transcript_name=BC110807 BX648492 BX648620 AK290278 EU832457 EU832539 EU446686 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101917.1 | |tss_id=hg_101917.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:04, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC110807 BX648492 BX648620 AK290278 EU832457 EU832539 EU446686 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | BC110807:0 BX648492:0 BX648620:0 AK290278:0 EU832457:0 EU832539:0 EU446686:0 ENST00000473442.1:34 uc064vab.1:34 |
TATA-Box annotation
| Distance to TSS: | 595 |
|---|---|
| Nearest PromoterID: | NM_001012993 |
| Entrez ID: | 401546 |
| Nearest Unigene: | Hs.125608 |
| Nearest Refseq: | NM_001012993 |
| Nearest Ensembl: | ENSG00000188959 |
| Gene Name: | chromosome 9 open reading frame 152 |
| Gene Alias: | bA470J20.2 |
| Gene Description: | chromosome 9 open reading frame 152 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
