Difference between revisions of "TSS:Hg 103047.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=6999 |entrez_id=266655 |gc_percent=0.393035 |gene_alias=LP2477|NCRNA00094|bA374P20.3 |gene_description=long intergenic non-prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NCRNA00094= | ||
| + | |all_trans=AK123322:-268 AK026880:423 | ||
| + | |bA374P20.3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-268 | ||
|distance_to_tss=6999 | |distance_to_tss=6999 | ||
| + | |end=134032440 | ||
|entrez_id=266655 | |entrez_id=266655 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
|gene_alias=LP2477|NCRNA00094|bA374P20.3 | |gene_alias=LP2477|NCRNA00094|bA374P20.3 | ||
|gene_description=long intergenic non-protein coding RNA 94 | |gene_description=long intergenic non-protein coding RNA 94 | ||
| − | |gene_name= | + | |gene_id=8019 |
| + | |gene_name=bromodomain containing 3 | ||
| + | |gene_source=HGNC:1104 | ||
| + | |gene_symbol=BRD3 | ||
| + | |gene_synonyms=KIAA0043 ORFX RING3L | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:1104 | ||
|nearest_ensembl=ENSG00000235106 | |nearest_ensembl=ENSG00000235106 | ||
|nearest_promoter_id=NR_015427 | |nearest_promoter_id=NR_015427 | ||
|nearest_refseq=NR_002800 | |nearest_refseq=NR_002800 | ||
|nearest_unigene=Hs.654869 | |nearest_unigene=Hs.654869 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=134032435 | ||
| + | |strand=- | ||
| + | |transcript_name=AK123322 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103047.1 | |tss_id=hg_103047.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 19:52, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK123322 |
|---|---|
| Distance: | -268 |
| Num_trans: | 2 |
| All_trans: | AK123322:-268 AK026880:423 |
TATA-Box annotation
| Distance to TSS: | 6999 |
|---|---|
| Nearest PromoterID: | NR_015427 |
| Entrez ID: | 266655 |
| Nearest Unigene: | Hs.654869 |
| Nearest Refseq: | NR_002800 |
| Nearest Ensembl: | ENSG00000235106 |
| Gene Name: | bromodomain containing 3 |
| Gene Alias: | LP2477 |
| Gene Description: | long intergenic non-protein coding RNA 94 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
