Difference between revisions of "TSS:Hg 103156.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=-1769 |entrez_id=6621 |gc_percent=0.756219 |gene_alias=PTFalpha|SNAP190 |gene_description=small nuclear RNA activating complex p...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |SNAP190= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance= | ||
|distance_to_tss=-1769 | |distance_to_tss=-1769 | ||
| + | |end=136400226 | ||
|entrez_id=6621 | |entrez_id=6621 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_003086 | |nearest_refseq=NM_003086 | ||
|nearest_unigene=Hs.113265 | |nearest_unigene=Hs.113265 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=136400186 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103156.1 | |tss_id=hg_103156.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 19:57, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -1769 |
|---|---|
| Nearest PromoterID: | NM_003086 |
| Entrez ID: | 6621 |
| Nearest Unigene: | Hs.113265 |
| Nearest Refseq: | NM_003086 |
| Nearest Ensembl: | ENSG00000165684 |
| Gene Name: | SNAPC4 |
| Gene Alias: | PTFalpha |
| Gene Description: | small nuclear RNA activating complex polypeptide 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
