Difference between revisions of "TSS:Hg 103636.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=117 |entrez_id=114131 |gc_percent=0.606965 |gene_alias=SCP|SPC|UCNIII |gene_description=urocortin 3 |gene_name=UCN3 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |SPC= | ||
| + | |UCNIII= | ||
| + | |all_trans=BC100867:-31 BC100868:-31 BC100869:-31 BC100870:-31 NM_053049:-110 ENST00000380433.4:-114 uc001ihx.2:-114 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=-31 | ||
|distance_to_tss=117 | |distance_to_tss=117 | ||
| + | |end=5365130 | ||
|entrez_id=114131 | |entrez_id=114131 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
|gene_alias=SCP|SPC|UCNIII | |gene_alias=SCP|SPC|UCNIII | ||
|gene_description=urocortin 3 | |gene_description=urocortin 3 | ||
| − | |gene_name=UCN3 | + | |gene_id=114131 |
| + | |gene_name=urocortin 3 | ||
| + | |gene_source=HGNC:17781 | ||
| + | |gene_symbol=UCN3 | ||
| + | |gene_synonyms=SPC UCNIII | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17781 | ||
|nearest_ensembl=ENSG00000178473 | |nearest_ensembl=ENSG00000178473 | ||
|nearest_promoter_id=NM_053049 | |nearest_promoter_id=NM_053049 | ||
|nearest_refseq=NM_053049 | |nearest_refseq=NM_053049 | ||
|nearest_unigene=Hs.511775 | |nearest_unigene=Hs.511775 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=5365122 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC100867 BC100868 BC100869 BC100870 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103636.1 | |tss_id=hg_103636.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC100867 BC100868 BC100869 BC100870 |
|---|---|
| Distance: | -31 |
| Num_trans: | 7 |
| All_trans: | BC100867:-31 BC100868:-31 BC100869:-31 BC100870:-31 NM_053049:-110 ENST00000380433.4:-114 uc001ihx.2:-114 |
TATA-Box annotation
| Distance to TSS: | 117 |
|---|---|
| Nearest PromoterID: | NM_053049 |
| Entrez ID: | 114131 |
| Nearest Unigene: | Hs.511775 |
| Nearest Refseq: | NM_053049 |
| Nearest Ensembl: | ENSG00000178473 |
| Gene Name: | urocortin 3 |
| Gene Alias: | SCP |
| Gene Description: | urocortin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
