Difference between revisions of "TSS:Hg 103920.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=168 |entrez_id=57118 |gc_percent=0.781095 |gene_alias=CKLiK|CaM-K1|CaMKID |gene_description=calcium/calmodulin dependent protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CaM-K1= | ||
| + | |CaMKID= | ||
| + | |all_trans=ENST00000378845.5:0 uc001iln.4:0 BC035745:0 AF286366:0 ENST00000487696.1:-35 uc057rtb.1:-35 CU690184:81 AB528894:81 KJ899309:81 KJ905511:81 DQ892464:82 DQ895676:82 AB081726:-100 NM_153498:-144 NM_020397:-144 AK289393:-145 ENST00000619168.4:-205 uc001ilp.5:-205 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| + | |distance=0 | ||
|distance_to_tss=168 | |distance_to_tss=168 | ||
| + | |end=12349735 | ||
|entrez_id=57118 | |entrez_id=57118 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=CKLiK|CaM-K1|CaMKID | |gene_alias=CKLiK|CaM-K1|CaMKID | ||
|gene_description=calcium/calmodulin dependent protein kinase ID | |gene_description=calcium/calmodulin dependent protein kinase ID | ||
| − | |gene_name=CAMK1D | + | |gene_id=57118 |
| + | |gene_name=calcium/calmodulin dependent protein kinase ID | ||
| + | |gene_source=HGNC:19341 | ||
| + | |gene_symbol=CAMK1D | ||
| + | |gene_synonyms=CKLiK | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:19341 | ||
|nearest_ensembl=ENSG00000183049 | |nearest_ensembl=ENSG00000183049 | ||
|nearest_promoter_id=NM_153498 | |nearest_promoter_id=NM_153498 | ||
|nearest_refseq=NM_020397 | |nearest_refseq=NM_020397 | ||
|nearest_unigene=Hs.600547 | |nearest_unigene=Hs.600547 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=12349686 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000378845.5 uc001iln.4 BC035745 AF286366 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_103920.1 | |tss_id=hg_103920.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5SQQ7 Q8IU85 | ||
}} | }} | ||
Revision as of 20:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000378845.5 uc001iln.4 BC035745 AF286366 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000378845.5:0 uc001iln.4:0 BC035745:0 AF286366:0 ENST00000487696.1:-35 uc057rtb.1:-35 CU690184:81 AB528894:81 KJ899309:81 KJ905511:81 DQ892464:82 DQ895676:82 AB081726:-100 NM_153498:-144 NM_020397:-144 AK289393:-145 ENST00000619168.4:-205 uc001ilp.5:-205 |
TATA-Box annotation
| Distance to TSS: | 168 |
|---|---|
| Nearest PromoterID: | NM_153498 |
| Entrez ID: | 57118 |
| Nearest Unigene: | Hs.600547 |
| Nearest Refseq: | NM_020397 |
| Nearest Ensembl: | ENSG00000183049 |
| Gene Name: | calcium/calmodulin dependent protein kinase ID |
| Gene Alias: | CKLiK |
| Gene Description: | calcium/calmodulin dependent protein kinase ID |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
