Difference between revisions of "TSS:Hg 10430.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-178745 |entrez_id=23254 |gc_percent=0.487562 |gene_alias=KAZ |gene_description="kazrin, periplakin interacting protein" |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=DQ578456:76 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=76 | ||
|distance_to_tss=-178745 | |distance_to_tss=-178745 | ||
| + | |end=14419974 | ||
|entrez_id=23254 | |entrez_id=23254 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_015209 | |nearest_refseq=NM_015209 | ||
|nearest_unigene=Hs.368823 | |nearest_unigene=Hs.368823 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=14419969 | ||
| + | |strand=- | ||
|tata_box="-43(GTCCAGATAAGG,-,0.00)" | |tata_box="-43(GTCCAGATAAGG,-,0.00)" | ||
| + | |transcript_name=DQ578456 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10430.1 | |tss_id=hg_10430.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 20:46, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | DQ578456 |
|---|---|
| Distance: | 76 |
| Num_trans: | 1 |
| All_trans: | DQ578456:76 |
TATA-Box annotation
| Distance to TSS: | -178745 |
|---|---|
| Nearest PromoterID: | NM_015209 |
| Entrez ID: | 23254 |
| Nearest Unigene: | Hs.368823 |
| Nearest Refseq: | NM_015209 |
| Nearest Ensembl: | ENSG00000189337 |
| Gene Name: | KAZN |
| Gene Alias: | KAZ |
| Gene Description: | "kazrin, periplakin interacting protein" |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-43(GTCCAGATAAGG,-,0.00)" |
