Difference between revisions of "TSS:Hg 104410.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=279 |entrez_id=54518 |gc_percent=0.572139 |gene_alias=INAG1|PREL1|RARP1|RIAM |gene_description=amyloid beta precursor protein b...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PREL1= | ||
| + | |RARP1= | ||
| + | |RIAM= | ||
| + | |all_trans=BC054516:136 AY152730:148 ENST00000356785.4:-188 uc001isr.4:-188 BC035636:-188 AK000812:-235 AK308916:-255 NM_019043:-276 ENST00000376236.8:-410 uc001iss.4:-410 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=136 | ||
|distance_to_tss=279 | |distance_to_tss=279 | ||
| + | |end=26438619 | ||
|entrez_id=54518 | |entrez_id=54518 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=INAG1|PREL1|RARP1|RIAM | |gene_alias=INAG1|PREL1|RARP1|RIAM | ||
|gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | |gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | ||
| − | |gene_name=APBB1IP | + | |gene_id=54518 |
| + | |gene_name=amyloid beta precursor protein binding family B member 1 interacting protein | ||
| + | |gene_source=HGNC:17379 | ||
| + | |gene_symbol=APBB1IP | ||
| + | |gene_synonyms=INAG1 RIAM | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17379 | ||
|nearest_ensembl=ENSG00000077420 | |nearest_ensembl=ENSG00000077420 | ||
|nearest_promoter_id=NM_019043 | |nearest_promoter_id=NM_019043 | ||
|nearest_refseq=NM_019043 | |nearest_refseq=NM_019043 | ||
|nearest_unigene=Hs.310421 | |nearest_unigene=Hs.310421 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=26438612 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC054516 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104410.1 | |tss_id=hg_104410.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 20:51, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC054516 |
|---|---|
| Distance: | 136 |
| Num_trans: | 10 |
| All_trans: | BC054516:136 AY152730:148 ENST00000356785.4:-188 uc001isr.4:-188 BC035636:-188 AK000812:-235 AK308916:-255 NM_019043:-276 ENST00000376236.8:-410 uc001iss.4:-410 |
TATA-Box annotation
| Distance to TSS: | 279 |
|---|---|
| Nearest PromoterID: | NM_019043 |
| Entrez ID: | 54518 |
| Nearest Unigene: | Hs.310421 |
| Nearest Refseq: | NM_019043 |
| Nearest Ensembl: | ENSG00000077420 |
| Gene Name: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Alias: | INAG1 |
| Gene Description: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
