Difference between revisions of "TSS:Hg 104669.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=-253 |entrez_id=1390 |gc_percent=0.711443 |gene_alias=CREM-2|ICER|hCREM-2 |gene_description=cAMP responsive element modulator |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ICER= | ||
| + | |all_trans=ENST00000354759.7:-36 uc001iya.4:-36 D14825:-36 ENST00000496019.5:-42 uc057sso.1:-42 ENST00000460270.5:-81 uc001ixz.4:-81 ENST00000469949.6:-96 uc057ssn.1:-96 ENST00000429130.7:-107 uc057ssm.1:-107 ENST00000495960.5:-135 uc057ssl.1:-135 ENST00000482633.5:-150 uc057ssk.1:-150 ENST00000466251.5:-209 uc057ssj.1:-209 ENST00000489321.5:214 uc057ssp.1:214 BC017117:-221 ENST00000490460.5:-239 uc057ssi.1:-239 ENST00000427847.6:247 ENST00000374728.7:247 NM_183060:247 NM_181571:247 uc057ssq.1:247 uc001iyc.4:247 ENST00000461968.5:-250 ENST00000345491.7:250 uc057ssh.1:-250 uc001iyb.4:250 BC041810:250 ENST00000487132.5:267 uc057ssr.1:267 ENST00000374726.7:-275 uc001ixx.4:-275 BC066342:-275 ENST00000489388.5:-292 uc057ssg.1:-292 ENST00000482646.5:-325 uc057ssf.1:-325 ENST00000496626.5:-357 NM_001267563:-357 NM_001267562:-357 NM_001881:-357 NM_183013:-357 NR_051975:-357 NR_051974:-357 NR_051973:-357 uc057sse.1:-357 ENST00000374721.7:-388 uc057ssd.1:-388 ENST00000474362.5:-407 uc001ixy.4:-407 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-36 | ||
|distance_to_tss=-253 | |distance_to_tss=-253 | ||
| + | |end=35127210 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=CREM-2|ICER|hCREM-2 | |gene_alias=CREM-2|ICER|hCREM-2 | ||
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
| − | |gene_name=CREM | + | |gene_id=1390 |
| + | |gene_name=cAMP responsive element modulator | ||
| + | |gene_source=HGNC:2352 | ||
| + | |gene_symbol=CREM | ||
| + | |gene_synonyms=hCREM-2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hCREM-2= | ||
| + | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
|nearest_promoter_id=NM_183060 | |nearest_promoter_id=NM_183060 | ||
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| + | |num_trans=55 | ||
| + | |species=human | ||
| + | |start=35127197 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000354759.7 uc001iya.4 D14825 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104669.1 | |tss_id=hg_104669.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q03060 | ||
}} | }} | ||
Revision as of 21:02, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000354759.7 uc001iya.4 D14825 |
|---|---|
| Distance: | -36 |
| Num_trans: | 55 |
| All_trans: | ENST00000354759.7:-36 uc001iya.4:-36 D14825:-36 ENST00000496019.5:-42 uc057sso.1:-42 ENST00000460270.5:-81 uc001ixz.4:-81 ENST00000469949.6:-96 uc057ssn.1:-96 ENST00000429130.7:-107 uc057ssm.1:-107 ENST00000495960.5:-135 uc057ssl.1:-135 ENST00000482633.5:-150 uc057ssk.1:-150 ENST00000466251.5:-209 uc057ssj.1:-209 ENST00000489321.5:214 uc057ssp.1:214 BC017117:-221 ENST00000490460.5:-239 uc057ssi.1:-239 ENST00000427847.6:247 ENST00000374728.7:247 NM_183060:247 NM_181571:247 uc057ssq.1:247 uc001iyc.4:247 ENST00000461968.5:-250 ENST00000345491.7:250 uc057ssh.1:-250 uc001iyb.4:250 BC041810:250 ENST00000487132.5:267 uc057ssr.1:267 ENST00000374726.7:-275 uc001ixx.4:-275 BC066342:-275 ENST00000489388.5:-292 uc057ssg.1:-292 ENST00000482646.5:-325 uc057ssf.1:-325 ENST00000496626.5:-357 NM_001267563:-357 NM_001267562:-357 NM_001881:-357 NM_183013:-357 NR_051975:-357 NR_051974:-357 NR_051973:-357 uc057sse.1:-357 ENST00000374721.7:-388 uc057ssd.1:-388 ENST00000474362.5:-407 uc001ixy.4:-407 |
TATA-Box annotation
| Distance to TSS: | -253 |
|---|---|
| Nearest PromoterID: | NM_183060 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
