Difference between revisions of "TSS:Hg 104779.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-1734 |entrez_id=11067 |gc_percent=0.636816 |gene_alias=DEPP|FIG|Fseg |gene_description=chromosome 10 open reading frame 10 |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |FIG= | ||
| + | |Fseg= | ||
| + | |all_trans=ENST00000465735.5:418 uc057sya.1:418 AK092770:418 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=418 | ||
|distance_to_tss=-1734 | |distance_to_tss=-1734 | ||
| + | |end=44980621 | ||
|entrez_id=11067 | |entrez_id=11067 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=DEPP|FIG|Fseg | |gene_alias=DEPP|FIG|Fseg | ||
|gene_description=chromosome 10 open reading frame 10 | |gene_description=chromosome 10 open reading frame 10 | ||
| − | |gene_name= | + | |gene_id=83937 |
| + | |gene_name=Ras association domain family member 4 | ||
| + | |gene_source=HGNC:20793 | ||
| + | |gene_symbol=RASSF4 | ||
| + | |gene_synonyms=AD037 MGC44914 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20793 | ||
|nearest_ensembl=ENSG00000165507 | |nearest_ensembl=ENSG00000165507 | ||
|nearest_promoter_id=NM_007021 | |nearest_promoter_id=NM_007021 | ||
|nearest_refseq=NM_007021 | |nearest_refseq=NM_007021 | ||
|nearest_unigene=Hs.93675 | |nearest_unigene=Hs.93675 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=44980610 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000465735.5 uc057sya.1 AK092770 | ||
| + | |tss_classification=no | ||
|tss_id=hg_104779.1 | |tss_id=hg_104779.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:07, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000465735.5 uc057sya.1 AK092770 |
|---|---|
| Distance: | 418 |
| Num_trans: | 3 |
| All_trans: | ENST00000465735.5:418 uc057sya.1:418 AK092770:418 |
TATA-Box annotation
| Distance to TSS: | -1734 |
|---|---|
| Nearest PromoterID: | NM_007021 |
| Entrez ID: | 11067 |
| Nearest Unigene: | Hs.93675 |
| Nearest Refseq: | NM_007021 |
| Nearest Ensembl: | ENSG00000165507 |
| Gene Name: | Ras association domain family member 4 |
| Gene Alias: | DEPP |
| Gene Description: | chromosome 10 open reading frame 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
