Difference between revisions of "TSS:Hg 104998.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=-25 |entrez_id=7019 |gc_percent=0.716418 |gene_alias=MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 |gene_description="transcrip...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MTTF1= | ||
| + | |MTTFA= | ||
| + | |TCF6= | ||
| + | |TCF6L1= | ||
| + | |TCF6L2= | ||
| + | |TCF6L3= | ||
| + | |all_trans=NM_003201:16 NM_001270782:16 NR_073073:16 ENST00000487519.5:-88 uc001jkf.5:-88 ENST00000373899.3:218 uc001jkg.5:218 BC029815:218 AK312558:278 M62810:289 ENST00000373895.7:307 uc031pve.2:307 BC018628:307 BC104482:311 BC126366:333 EU279428:393 HQ258758:415 KJ897655:415 AB451366:421 AB464302:421 CR407653:421 BT019658:421 BT019659:421 AB451241:421 ENST00000395377.2:477 uc057tjs.1:477 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=16 | ||
|distance_to_tss=-25 | |distance_to_tss=-25 | ||
| + | |end=58385127 | ||
|entrez_id=7019 | |entrez_id=7019 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 | |gene_alias=MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 | ||
|gene_description="transcription factor A, mitochondrial" | |gene_description="transcription factor A, mitochondrial" | ||
| − | |gene_name=TFAM | + | |gene_id=7019 |
| + | |gene_name="transcription factor A, mitochondrial" | ||
| + | |gene_source=HGNC:11741 | ||
| + | |gene_symbol=TFAM | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11741 | ||
|nearest_ensembl=ENSG00000108064 | |nearest_ensembl=ENSG00000108064 | ||
|nearest_promoter_id=NR_073073 | |nearest_promoter_id=NR_073073 | ||
|nearest_refseq=NM_003201 | |nearest_refseq=NM_003201 | ||
|nearest_unigene=Hs.594250 | |nearest_unigene=Hs.594250 | ||
| + | |num_trans=26 | ||
| + | |species=human | ||
| + | |start=58385109 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_003201 NM_001270782 NR_073073 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104998.1 | |tss_id=hg_104998.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q00059 | ||
}} | }} | ||
Revision as of 21:16, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_003201 NM_001270782 NR_073073 |
|---|---|
| Distance: | 16 |
| Num_trans: | 26 |
| All_trans: | NM_003201:16 NM_001270782:16 NR_073073:16 ENST00000487519.5:-88 uc001jkf.5:-88 ENST00000373899.3:218 uc001jkg.5:218 BC029815:218 AK312558:278 M62810:289 ENST00000373895.7:307 uc031pve.2:307 BC018628:307 BC104482:311 BC126366:333 EU279428:393 HQ258758:415 KJ897655:415 AB451366:421 AB464302:421 CR407653:421 BT019658:421 BT019659:421 AB451241:421 ENST00000395377.2:477 uc057tjs.1:477 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NR_073073 |
| Entrez ID: | 7019 |
| Nearest Unigene: | Hs.594250 |
| Nearest Refseq: | NM_003201 |
| Nearest Ensembl: | ENSG00000108064 |
| Gene Name: | "transcription factor A, mitochondrial" |
| Gene Alias: | MTDPS15 |
| Gene Description: | "transcription factor A, mitochondrial" |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
