Difference between revisions of "TSS:Hg 105415.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=17 |entrez_id=219699 |gc_percent=0.79602 |gene_alias=UNC5H2|p53RDL1 |gene_description=unc-5 netrin receptor B |gene_name=UNC5B |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000335350.10:0 NM_001244889:0 NM_170744:0 uc001jro.4:0 AK128132:0 AY358351:10 AB096256:13 ENST00000373192.4:348 uc001jrp.4:348 AY126437:348 BC166694:406 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| + | |distance=0 | ||
|distance_to_tss=17 | |distance_to_tss=17 | ||
| + | |end=71212579 | ||
|entrez_id=219699 | |entrez_id=219699 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
|gene_alias=UNC5H2|p53RDL1 | |gene_alias=UNC5H2|p53RDL1 | ||
|gene_description=unc-5 netrin receptor B | |gene_description=unc-5 netrin receptor B | ||
| − | |gene_name=UNC5B | + | |gene_id=219699 |
| + | |gene_name=unc-5 netrin receptor B | ||
| + | |gene_source=HGNC:12568 | ||
| + | |gene_symbol=UNC5B | ||
| + | |gene_synonyms=UNC5H2 p53RDL1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12568 | ||
|nearest_ensembl=ENSG00000107731 | |nearest_ensembl=ENSG00000107731 | ||
|nearest_promoter_id=NM_170744 | |nearest_promoter_id=NM_170744 | ||
|nearest_refseq=NM_170744 | |nearest_refseq=NM_170744 | ||
|nearest_unigene=Hs.522997 | |nearest_unigene=Hs.522997 | ||
| + | |num_trans=11 | ||
| + | |p53RDL1= | ||
| + | |species=human | ||
| + | |start=71212524 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000335350.10 NM_001244889 NM_170744 uc001jro.4 AK128132 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105415.1 | |tss_id=hg_105415.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8IZJ1 | ||
}} | }} | ||
Revision as of 21:34, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000335350.10 NM_001244889 NM_170744 uc001jro.4 AK128132 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000335350.10:0 NM_001244889:0 NM_170744:0 uc001jro.4:0 AK128132:0 AY358351:10 AB096256:13 ENST00000373192.4:348 uc001jrp.4:348 AY126437:348 BC166694:406 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_170744 |
| Entrez ID: | 219699 |
| Nearest Unigene: | Hs.522997 |
| Nearest Refseq: | NM_170744 |
| Nearest Ensembl: | ENSG00000107731 |
| Gene Name: | unc-5 netrin receptor B |
| Gene Alias: | UNC5H2 |
| Gene Description: | unc-5 netrin receptor B |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
