Difference between revisions of "TSS:Hg 105652.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=535685 |entrez_id=83938 |gc_percent=0.517413 |gene_alias=CDA017 |gene_description=chromosome 10 open reading frame 11 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000496424.2:-108 uc057uhl.1:-108 AK125328:-108 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-108 | ||
|distance_to_tss=535685 | |distance_to_tss=535685 | ||
| + | |end=76318450 | ||
|entrez_id=83938 | |entrez_id=83938 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
|gene_alias=CDA017 | |gene_alias=CDA017 | ||
|gene_description=chromosome 10 open reading frame 11 | |gene_description=chromosome 10 open reading frame 11 | ||
| − | |gene_name=C10orf11 | + | |gene_id=83938 |
| + | |gene_name=chromosome 10 open reading frame 11 | ||
| + | |gene_source=HGNC:23405 | ||
| + | |gene_symbol=C10orf11 | ||
| + | |gene_synonyms=CDA017 OCA7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23405 | ||
|nearest_ensembl=ENSG00000148655 | |nearest_ensembl=ENSG00000148655 | ||
|nearest_promoter_id=NM_032024 | |nearest_promoter_id=NM_032024 | ||
|nearest_refseq=NM_032024 | |nearest_refseq=NM_032024 | ||
|nearest_unigene=Hs.118161 | |nearest_unigene=Hs.118161 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=76318441 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000496424.2 uc057uhl.1 AK125328 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105652.1 | |tss_id=hg_105652.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=M0R2H0 | ||
}} | }} | ||
Revision as of 21:44, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000496424.2 uc057uhl.1 AK125328 |
|---|---|
| Distance: | -108 |
| Num_trans: | 3 |
| All_trans: | ENST00000496424.2:-108 uc057uhl.1:-108 AK125328:-108 |
TATA-Box annotation
| Distance to TSS: | 535685 |
|---|---|
| Nearest PromoterID: | NM_032024 |
| Entrez ID: | 83938 |
| Nearest Unigene: | Hs.118161 |
| Nearest Refseq: | NM_032024 |
| Nearest Ensembl: | ENSG00000148655 |
| Gene Name: | chromosome 10 open reading frame 11 |
| Gene Alias: | CDA017 |
| Gene Description: | chromosome 10 open reading frame 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
