Difference between revisions of "TSS:Hg 105671.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=143736 |entrez_id=9231 |gc_percent=0.457711 |gene_alias=LP-DLG|P-DLG5|PDLG |gene_description=discs large MAGUK scaffold protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |P-DLG5= | ||
| + | |PDLG= | ||
| + | |all_trans=ENST00000434097.2:7 uc057uji.1:7 BC067888:7 DQ585990:-185 ENST00000600739.1:307 uc057ujj.1:307 DQ586710:-318 DQ577285:-498 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=7 | ||
|distance_to_tss=143736 | |distance_to_tss=143736 | ||
| + | |end=77782859 | ||
|entrez_id=9231 | |entrez_id=9231 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_004747 | |nearest_refseq=NM_004747 | ||
|nearest_unigene=Hs.652690 | |nearest_unigene=Hs.652690 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=77782848 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000434097.2 uc057uji.1 BC067888 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105671.1 | |tss_id=hg_105671.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:45, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000434097.2 uc057uji.1 BC067888 |
|---|---|
| Distance: | 7 |
| Num_trans: | 8 |
| All_trans: | ENST00000434097.2:7 uc057uji.1:7 BC067888:7 DQ585990:-185 ENST00000600739.1:307 uc057ujj.1:307 DQ586710:-318 DQ577285:-498 |
TATA-Box annotation
| Distance to TSS: | 143736 |
|---|---|
| Nearest PromoterID: | NM_004747 |
| Entrez ID: | 9231 |
| Nearest Unigene: | Hs.652690 |
| Nearest Refseq: | NM_004747 |
| Nearest Ensembl: | ENSG00000151208 |
| Gene Name: | DLG5 |
| Gene Alias: | LP-DLG |
| Gene Description: | discs large MAGUK scaffold protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
