Difference between revisions of "TSS:Hg 105814.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=3324 |entrez_id=653509 |gc_percent=0.542289 |gene_alias=COLEC4|PSAP|PSP-A|PSPA|SFTP1|SFTPA1B|SP-A|SP-A1|SPA|SPA1 |gene_description=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PSAP= | ||
| + | |PSP-A= | ||
| + | |PSPA= | ||
| + | |SFTP1= | ||
| + | |SFTPA1B= | ||
| + | |SP-A= | ||
| + | |SP-A1= | ||
| + | |SPA= | ||
| + | |SPA1= | ||
| + | |all_trans=AK309522:-383 | ||
| + | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=-383 | ||
|distance_to_tss=3324 | |distance_to_tss=3324 | ||
| + | |end=79614266 | ||
|entrez_id=653509 | |entrez_id=653509 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 12: | Line 25: | ||
|nearest_refseq=NM_005411 | |nearest_refseq=NM_005411 | ||
|nearest_unigene=Hs.535295 | |nearest_unigene=Hs.535295 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=79614259 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK309522 | ||
| + | |tss_classification=no | ||
|tss_id=hg_105814.1 | |tss_id=hg_105814.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 21:51, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK309522 |
|---|---|
| Distance: | -383 |
| Num_trans: | 1 |
| All_trans: | AK309522:-383 |
TATA-Box annotation
| Distance to TSS: | 3324 |
|---|---|
| Nearest PromoterID: | NM_001164646 |
| Entrez ID: | 653509 |
| Nearest Unigene: | Hs.535295 |
| Nearest Refseq: | NM_005411 |
| Nearest Ensembl: | ENSG00000122852 |
| Gene Name: | SFTPA1 |
| Gene Alias: | COLEC4 |
| Gene Description: | surfactant protein A1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
