Difference between revisions of "TSS:Hg 106013.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-388 |entrez_id=119385 |gc_percent=0.696517 |gene_alias=- |gene_description="ArfGAP with GTPase domain, ankyrin repeat and PH d...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000433214.2:366 NM_133447:366 uc057urd.1:366 AK097165:366 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=366 | ||
|distance_to_tss=-388 | |distance_to_tss=-388 | ||
| + | |end=86970375 | ||
|entrez_id=119385 | |entrez_id=119385 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description="ArfGAP with GTPase domain, ankyrin repeat and PH domain 11" | |gene_description="ArfGAP with GTPase domain, ankyrin repeat and PH domain 11" | ||
| − | |gene_name=AGAP11 | + | |gene_id=119385 |
| + | |gene_name="ArfGAP with GTPase domain, ankyrin repeat and PH domain 11" | ||
| + | |gene_source=HGNC:29421 | ||
| + | |gene_symbol=AGAP11 | ||
| + | |gene_synonyms=KIAA1975 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29421 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NM_133447 | |nearest_promoter_id=NM_133447 | ||
|nearest_refseq=NM_133447 | |nearest_refseq=NM_133447 | ||
|nearest_unigene=Hs.511787 | |nearest_unigene=Hs.511787 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=86970331 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000433214.2 NM_133447 uc057urd.1 AK097165 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106013.1 | |tss_id=hg_106013.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8TF27 | ||
}} | }} | ||
Revision as of 22:00, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000433214.2 NM_133447 uc057urd.1 AK097165 |
|---|---|
| Distance: | 366 |
| Num_trans: | 4 |
| All_trans: | ENST00000433214.2:366 NM_133447:366 uc057urd.1:366 AK097165:366 |
TATA-Box annotation
| Distance to TSS: | -388 |
|---|---|
| Nearest PromoterID: | NM_133447 |
| Entrez ID: | 119385 |
| Nearest Unigene: | Hs.511787 |
| Nearest Refseq: | NM_133447 |
| Nearest Ensembl: | |
| Gene Name: | "ArfGAP with GTPase domain, ankyrin repeat and PH domain 11" |
| Gene Alias: | - |
| Gene Description: | "ArfGAP with GTPase domain, ankyrin repeat and PH domain 11" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
