Difference between revisions of "TSS:Hg 106151.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=34 |entrez_id=24138 |gc_percent=0.537313 |gene_alias=ISG58|P58|RI58 |gene_description=interferon induced protein with tetratrico...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |P58= | ||
| + | |RI58= | ||
| + | |all_trans=ENST00000371795.4:0 NM_012420:0 uc010qnh.3:0 BC025786:0 U34605:36 AK312358:89 AK293346:116 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=0 | ||
|distance_to_tss=34 | |distance_to_tss=34 | ||
| + | |end=89414646 | ||
|entrez_id=24138 | |entrez_id=24138 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
|gene_alias=ISG58|P58|RI58 | |gene_alias=ISG58|P58|RI58 | ||
|gene_description=interferon induced protein with tetratricopeptide repeats 5 | |gene_description=interferon induced protein with tetratricopeptide repeats 5 | ||
| − | |gene_name=IFIT5 | + | |gene_id=24138 |
| + | |gene_name=interferon induced protein with tetratricopeptide repeats 5 | ||
| + | |gene_source=HGNC:13328 | ||
| + | |gene_symbol=IFIT5 | ||
| + | |gene_synonyms=RI58 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13328 | ||
|nearest_ensembl=ENSG00000152778 | |nearest_ensembl=ENSG00000152778 | ||
|nearest_promoter_id=NM_012420 | |nearest_promoter_id=NM_012420 | ||
|nearest_refseq=NM_012420 | |nearest_refseq=NM_012420 | ||
|nearest_unigene=Hs.252839 | |nearest_unigene=Hs.252839 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=89414557 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000371795.4 NM_012420 uc010qnh.3 BC025786 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106151.1 | |tss_id=hg_106151.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q13325 | ||
}} | }} | ||
Revision as of 22:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000371795.4 NM_012420 uc010qnh.3 BC025786 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000371795.4:0 NM_012420:0 uc010qnh.3:0 BC025786:0 U34605:36 AK312358:89 AK293346:116 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NM_012420 |
| Entrez ID: | 24138 |
| Nearest Unigene: | Hs.252839 |
| Nearest Refseq: | NM_012420 |
| Nearest Ensembl: | ENSG00000152778 |
| Gene Name: | interferon induced protein with tetratricopeptide repeats 5 |
| Gene Alias: | ISG58 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
