Difference between revisions of "TSS:Hg 106152.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=102 |entrez_id=24138 |gc_percent=0.676617 |gene_alias=ISG58|P58|RI58 |gene_description=interferon induced protein with tetratri...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |P58= | ||
| + | |RI58= | ||
| + | |all_trans=U34605:3 AK312358:56 BC025786:-73 ENST00000371795.4:-76 uc010qnh.3:-76 AK293346:83 NM_012420:-94 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=3 | ||
|distance_to_tss=102 | |distance_to_tss=102 | ||
| + | |end=89414679 | ||
|entrez_id=24138 | |entrez_id=24138 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=ISG58|P58|RI58 | |gene_alias=ISG58|P58|RI58 | ||
|gene_description=interferon induced protein with tetratricopeptide repeats 5 | |gene_description=interferon induced protein with tetratricopeptide repeats 5 | ||
| − | |gene_name=IFIT5 | + | |gene_id=24138 |
| + | |gene_name=interferon induced protein with tetratricopeptide repeats 5 | ||
| + | |gene_source=HGNC:13328 | ||
| + | |gene_symbol=IFIT5 | ||
| + | |gene_synonyms=RI58 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13328 | ||
|nearest_ensembl=ENSG00000152778 | |nearest_ensembl=ENSG00000152778 | ||
|nearest_promoter_id=NM_012420 | |nearest_promoter_id=NM_012420 | ||
|nearest_refseq=NM_012420 | |nearest_refseq=NM_012420 | ||
|nearest_unigene=Hs.252839 | |nearest_unigene=Hs.252839 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=89414661 | ||
| + | |strand=+ | ||
| + | |transcript_name=U34605 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106152.1 | |tss_id=hg_106152.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | U34605 |
|---|---|
| Distance: | 3 |
| Num_trans: | 7 |
| All_trans: | U34605:3 AK312358:56 BC025786:-73 ENST00000371795.4:-76 uc010qnh.3:-76 AK293346:83 NM_012420:-94 |
TATA-Box annotation
| Distance to TSS: | 102 |
|---|---|
| Nearest PromoterID: | NM_012420 |
| Entrez ID: | 24138 |
| Nearest Unigene: | Hs.252839 |
| Nearest Refseq: | NM_012420 |
| Nearest Ensembl: | ENSG00000152778 |
| Gene Name: | interferon induced protein with tetratricopeptide repeats 5 |
| Gene Alias: | ISG58 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
