Difference between revisions of "TSS:Hg 106160.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=72 |entrez_id=9585 |gc_percent=0.60199 |gene_alias=CT90|KRMP1|MPHOSPH1|MPP-1|MPP1 |gene_description=kinesin family member 20B |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KRMP1= | ||
| + | |MPHOSPH1= | ||
| + | |MPP-1= | ||
| + | |MPP1= | ||
| + | |all_trans=ENST00000447580.1:12 uc057uur.1:12 AK074336:-17 BC042130:-19 BC046134:-20 AB033337:-20 BC093089:-22 AL117496:-22 BC058913:-23 BC108688:-29 ENST00000371728.7:-40 uc001kgs.3:-40 BC012585:-40 AY282406:-44 ENST00000260753.8:-47 uc001kgr.3:-47 AK290439:-47 NM_016195:-67 NM_001284259:-67 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=12 | ||
|distance_to_tss=72 | |distance_to_tss=72 | ||
| + | |end=89701667 | ||
|entrez_id=9585 | |entrez_id=9585 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=CT90|KRMP1|MPHOSPH1|MPP-1|MPP1 | |gene_alias=CT90|KRMP1|MPHOSPH1|MPP-1|MPP1 | ||
|gene_description=kinesin family member 20B | |gene_description=kinesin family member 20B | ||
| − | |gene_name=KIF20B | + | |gene_id=9585 |
| + | |gene_name=kinesin family member 20B | ||
| + | |gene_source=HGNC:7212 | ||
| + | |gene_symbol=KIF20B | ||
| + | |gene_synonyms=CT90 KRMP1 MPP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7212 | ||
|nearest_ensembl=ENSG00000138182 | |nearest_ensembl=ENSG00000138182 | ||
|nearest_promoter_id=NM_016195 | |nearest_promoter_id=NM_016195 | ||
|nearest_refseq=NM_016195 | |nearest_refseq=NM_016195 | ||
|nearest_unigene=Hs.240 | |nearest_unigene=Hs.240 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=89701656 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000447580.1 uc057uur.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106160.1 | |tss_id=hg_106160.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A0A0MSJ5 | ||
}} | }} | ||
Revision as of 22:06, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000447580.1 uc057uur.1 |
|---|---|
| Distance: | 12 |
| Num_trans: | 19 |
| All_trans: | ENST00000447580.1:12 uc057uur.1:12 AK074336:-17 BC042130:-19 BC046134:-20 AB033337:-20 BC093089:-22 AL117496:-22 BC058913:-23 BC108688:-29 ENST00000371728.7:-40 uc001kgs.3:-40 BC012585:-40 AY282406:-44 ENST00000260753.8:-47 uc001kgr.3:-47 AK290439:-47 NM_016195:-67 NM_001284259:-67 |
TATA-Box annotation
| Distance to TSS: | 72 |
|---|---|
| Nearest PromoterID: | NM_016195 |
| Entrez ID: | 9585 |
| Nearest Unigene: | Hs.240 |
| Nearest Refseq: | NM_016195 |
| Nearest Ensembl: | ENSG00000138182 |
| Gene Name: | kinesin family member 20B |
| Gene Alias: | CT90 |
| Gene Description: | kinesin family member 20B |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
