Difference between revisions of "TSS:Hg 106188.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=22 |entrez_id=10556 |gc_percent=0.631841 |gene_alias=TSG15 |gene_description=ribonuclease P/MRP subunit p30 |gene_name=RPP30 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000487998.5:0 ENST00000277882.7:0 uc057uvb.1:0 uc057uvc.1:0 AL833628:0 AK296196:0 U77665:0 AK312900:0 AK225532:0 KJ893074:0 DQ893181:0 DQ896488:0 ENST00000413330.5:-7 NM_006413:-7 NM_001104546:-7 uc057uva.1:-7 ENST00000371703.7:-243 uc009xtx.4:-243 BC006991:-441 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=22 | |distance_to_tss=22 | ||
| + | |end=90871989 | ||
|entrez_id=10556 | |entrez_id=10556 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=TSG15 | |gene_alias=TSG15 | ||
|gene_description=ribonuclease P/MRP subunit p30 | |gene_description=ribonuclease P/MRP subunit p30 | ||
| − | |gene_name=RPP30 | + | |gene_id=10556 |
| + | |gene_name=ribonuclease P/MRP 30kDa subunit | ||
| + | |gene_source=HGNC:17688 | ||
| + | |gene_symbol=RPP30 | ||
| + | |gene_synonyms=TSG15 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17688 | ||
|nearest_ensembl=ENSG00000148688 | |nearest_ensembl=ENSG00000148688 | ||
|nearest_promoter_id=NM_006413 | |nearest_promoter_id=NM_006413 | ||
|nearest_refseq=NM_006413 | |nearest_refseq=NM_006413 | ||
|nearest_unigene=Hs.139120 | |nearest_unigene=Hs.139120 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=90871958 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000487998.5 ENST00000277882.7 uc057uvb.1 uc057uvc.1 AL833628 AK296196 U77665 AK312900 AK225532 KJ893074 DQ893181 DQ896488 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106188.1 | |tss_id=hg_106188.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DJR3 Q5VU11 | ||
}} | }} | ||
Revision as of 22:07, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000487998.5 ENST00000277882.7 uc057uvb.1 uc057uvc.1 AL833628 AK296196 U77665 AK312900 AK225532 KJ893074 DQ893181 DQ896488 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000487998.5:0 ENST00000277882.7:0 uc057uvb.1:0 uc057uvc.1:0 AL833628:0 AK296196:0 U77665:0 AK312900:0 AK225532:0 KJ893074:0 DQ893181:0 DQ896488:0 ENST00000413330.5:-7 NM_006413:-7 NM_001104546:-7 uc057uva.1:-7 ENST00000371703.7:-243 uc009xtx.4:-243 BC006991:-441 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_006413 |
| Entrez ID: | 10556 |
| Nearest Unigene: | Hs.139120 |
| Nearest Refseq: | NM_006413 |
| Nearest Ensembl: | ENSG00000148688 |
| Gene Name: | ribonuclease P/MRP 30kDa subunit |
| Gene Alias: | TSG15 |
| Gene Description: | ribonuclease P/MRP subunit p30 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
