Difference between revisions of "TSS:Hg 106219.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-563 |entrez_id=143279 |gc_percent=0.646766 |gene_alias=- |gene_description=HECT domain E3 ubiquitin protein ligase 2 |gene_name...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000631422.1:-436 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=-436 | ||
|distance_to_tss=-563 | |distance_to_tss=-563 | ||
| + | |end=91409729 | ||
|entrez_id=143279 | |entrez_id=143279 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=HECT domain E3 ubiquitin protein ligase 2 | |gene_description=HECT domain E3 ubiquitin protein ligase 2 | ||
| − | |gene_name=HECTD2 | + | |gene_id=143279 |
| + | |gene_name=HECT domain E3 ubiquitin protein ligase 2 | ||
| + | |gene_source=HGNC:26736 | ||
| + | |gene_symbol=HECTD2 | ||
| + | |gene_synonyms=FLJ37306 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26736 | ||
|nearest_ensembl=ENSG00000165338 | |nearest_ensembl=ENSG00000165338 | ||
|nearest_promoter_id=NM_001284274 | |nearest_promoter_id=NM_001284274 | ||
|nearest_refseq=NM_173497 | |nearest_refseq=NM_173497 | ||
|nearest_unigene=Hs.596096 | |nearest_unigene=Hs.596096 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=91409715 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000631422.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106219.1 | |tss_id=hg_106219.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000631422.1 |
|---|---|
| Distance: | -436 |
| Num_trans: | 1 |
| All_trans: | ENST00000631422.1:-436 |
TATA-Box annotation
| Distance to TSS: | -563 |
|---|---|
| Nearest PromoterID: | NM_001284274 |
| Entrez ID: | 143279 |
| Nearest Unigene: | Hs.596096 |
| Nearest Refseq: | NM_173497 |
| Nearest Ensembl: | ENSG00000165338 |
| Gene Name: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Alias: | - |
| Gene Description: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
