Difference between revisions of "TSS:Hg 106234.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=26965 |entrez_id=22849 |gc_percent=0.547264 |gene_alias=- |gene_description=cytoplasmic polyadenylation element binding protein...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000335274.2:0 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=0 | ||
|distance_to_tss=26965 | |distance_to_tss=26965 | ||
| + | |end=92216338 | ||
|entrez_id=22849 | |entrez_id=22849 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=cytoplasmic polyadenylation element binding protein 3 | |gene_description=cytoplasmic polyadenylation element binding protein 3 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=NHP2 ribonucleoprotein pseudogene 1 | ||
| + | |gene_source=HGNC:23582 | ||
| + | |gene_symbol=NHP2P1 | ||
| + | |gene_synonyms=bA360G10.4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23582 | ||
|nearest_ensembl=ENSG00000107864 | |nearest_ensembl=ENSG00000107864 | ||
|nearest_promoter_id=NM_001178137 | |nearest_promoter_id=NM_001178137 | ||
|nearest_refseq=NM_014912 | |nearest_refseq=NM_014912 | ||
|nearest_unigene=Hs.131683 | |nearest_unigene=Hs.131683 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=92216290 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000335274.2 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106234.1 | |tss_id=hg_106234.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:09, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000335274.2 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | ENST00000335274.2:0 |
TATA-Box annotation
| Distance to TSS: | 26965 |
|---|---|
| Nearest PromoterID: | NM_001178137 |
| Entrez ID: | 22849 |
| Nearest Unigene: | Hs.131683 |
| Nearest Refseq: | NM_014912 |
| Nearest Ensembl: | ENSG00000107864 |
| Gene Name: | NHP2 ribonucleoprotein pseudogene 1 |
| Gene Alias: | - |
| Gene Description: | cytoplasmic polyadenylation element binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
