Difference between revisions of "TSS:Hg 106301.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-1 |entrez_id=159371 |gc_percent=0.756219 |gene_alias=C10orf60|POST|TMEM20 |gene_description=solute carrier family 35 member G1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |POST= | ||
| + | |TMEM20= | ||
| + | |all_trans=ENST00000427197.1:0 ENST00000371408.7:0 ENST00000483386.5:0 ENST00000605679.5:0 ENST00000494992.5:0 NM_001134658:0 NM_153226:0 uc001kjg.3:0 uc001kjf.3:0 uc001kjj.4:0 uc057uyc.1:0 uc057uyd.1:0 AK091309:0 BC036382:0 BC058549:0 BC143283:0 BC143284:0 BC104814:0 ENST00000603665.1:14 uc057uye.1:14 BC047102:14 KJ895710:26 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
| + | |end=93894008 | ||
|entrez_id=159371 | |entrez_id=159371 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=C10orf60|POST|TMEM20 | |gene_alias=C10orf60|POST|TMEM20 | ||
|gene_description=solute carrier family 35 member G1 | |gene_description=solute carrier family 35 member G1 | ||
| − | |gene_name=SLC35G1 | + | |gene_id=159371 |
| + | |gene_name=solute carrier family 35 member G1 | ||
| + | |gene_source=HGNC:26607 | ||
| + | |gene_symbol=SLC35G1 | ||
| + | |gene_synonyms=C10orf60 FLJ33990 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26607 | ||
|nearest_ensembl=ENSG00000176273 | |nearest_ensembl=ENSG00000176273 | ||
|nearest_promoter_id=NR_144336 | |nearest_promoter_id=NR_144336 | ||
|nearest_refseq=NM_153226 | |nearest_refseq=NM_153226 | ||
|nearest_unigene=Hs.632085 | |nearest_unigene=Hs.632085 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=93893930 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000427197.1 ENST00000371408.7 ENST00000483386.5 ENST00000605679.5 ENST00000494992.5 NM_001134658 NM_153226 uc001kjg.3 uc001kjf.3 uc001kjj.4 uc057uyc.1 uc057uyd.1 AK091309 BC036382 BC058549 BC143283 BC143284 BC104814 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106301.1 | |tss_id=hg_106301.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7ZKP0 B7ZKP1 D3DR41 Q2M3R5 S4R2Y7 | ||
}} | }} | ||
Revision as of 22:12, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000427197.1 ENST00000371408.7 ENST00000483386.5 ENST00000605679.5 ENST00000494992.5 NM_001134658 NM_153226 uc001kjg.3 uc001kjf.3 uc001kjj.4 uc057uyc.1 uc057uyd.1 AK091309 BC036382 BC058549 BC143283 BC143284 BC104814 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000427197.1:0 ENST00000371408.7:0 ENST00000483386.5:0 ENST00000605679.5:0 ENST00000494992.5:0 NM_001134658:0 NM_153226:0 uc001kjg.3:0 uc001kjf.3:0 uc001kjj.4:0 uc057uyc.1:0 uc057uyd.1:0 AK091309:0 BC036382:0 BC058549:0 BC143283:0 BC143284:0 BC104814:0 ENST00000603665.1:14 uc057uye.1:14 BC047102:14 KJ895710:26 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NR_144336 |
| Entrez ID: | 159371 |
| Nearest Unigene: | Hs.632085 |
| Nearest Refseq: | NM_153226 |
| Nearest Ensembl: | ENSG00000176273 |
| Gene Name: | solute carrier family 35 member G1 |
| Gene Alias: | C10orf60 |
| Gene Description: | solute carrier family 35 member G1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
