Difference between revisions of "TSS:Hg 106302.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=50 |entrez_id=159371 |gc_percent=0.766169 |gene_alias=C10orf60|POST|TMEM20 |gene_description=solute carrier family 35 member G1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |POST= | ||
| + | |TMEM20= | ||
| + | |all_trans=ENST00000603665.1:0 uc057uye.1:0 BC047102:0 KJ895710:6 BC104814:-8 ENST00000494992.5:-10 uc057uyd.1:-10 BC143283:-10 BC143284:-10 ENST00000605679.5:-11 uc057uyc.1:-11 BC058549:-11 ENST00000483386.5:-21 uc001kjj.4:-21 BC036382:-21 ENST00000427197.1:-39 ENST00000371408.7:-39 NM_001134658:-39 NM_153226:-39 uc001kjg.3:-39 uc001kjf.3:-39 AK091309:-39 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=0 | ||
|distance_to_tss=50 | |distance_to_tss=50 | ||
| + | |end=93894028 | ||
|entrez_id=159371 | |entrez_id=159371 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=C10orf60|POST|TMEM20 | |gene_alias=C10orf60|POST|TMEM20 | ||
|gene_description=solute carrier family 35 member G1 | |gene_description=solute carrier family 35 member G1 | ||
| − | |gene_name=SLC35G1 | + | |gene_id=159371 |
| + | |gene_name=solute carrier family 35 member G1 | ||
| + | |gene_source=HGNC:26607 | ||
| + | |gene_symbol=SLC35G1 | ||
| + | |gene_synonyms=C10orf60 FLJ33990 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26607 | ||
|nearest_ensembl=ENSG00000176273 | |nearest_ensembl=ENSG00000176273 | ||
|nearest_promoter_id=NM_001134658 | |nearest_promoter_id=NM_001134658 | ||
|nearest_refseq=NM_153226 | |nearest_refseq=NM_153226 | ||
|nearest_unigene=Hs.632085 | |nearest_unigene=Hs.632085 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=93894011 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000603665.1 uc057uye.1 BC047102 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106302.1 | |tss_id=hg_106302.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=D3DR41 | ||
}} | }} | ||
Revision as of 22:12, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000603665.1 uc057uye.1 BC047102 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000603665.1:0 uc057uye.1:0 BC047102:0 KJ895710:6 BC104814:-8 ENST00000494992.5:-10 uc057uyd.1:-10 BC143283:-10 BC143284:-10 ENST00000605679.5:-11 uc057uyc.1:-11 BC058549:-11 ENST00000483386.5:-21 uc001kjj.4:-21 BC036382:-21 ENST00000427197.1:-39 ENST00000371408.7:-39 NM_001134658:-39 NM_153226:-39 uc001kjg.3:-39 uc001kjf.3:-39 AK091309:-39 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_001134658 |
| Entrez ID: | 159371 |
| Nearest Unigene: | Hs.632085 |
| Nearest Refseq: | NM_153226 |
| Nearest Ensembl: | ENSG00000176273 |
| Gene Name: | solute carrier family 35 member G1 |
| Gene Alias: | C10orf60 |
| Gene Description: | solute carrier family 35 member G1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
