Difference between revisions of "TSS:Hg 106336.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-40 |entrez_id=1562 |gc_percent=0.507463 |gene_alias=CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 |gene_description=cytochrome P450...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CYP2C= | ||
| + | |CYP2C17= | ||
| + | |P450-6B/29C= | ||
| + | |P450IIC17= | ||
| + | |all_trans=NM_001128925:34 NM_000772:34 ENST00000285979.10:161 uc001kjv.6:161 M61856:161 BC069666:166 ENST00000339022.6:315 uc001kjw.6:315 BC096257:315 BC096258:315 BC096259:315 BC096260:315 M61853:318 AK313403:335 AK223510:335 CU686960:360 HQ447473:360 KJ891015:360 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=34 | ||
|distance_to_tss=-40 | |distance_to_tss=-40 | ||
| + | |end=94683460 | ||
|entrez_id=1562 | |entrez_id=1562 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 | |gene_alias=CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 | ||
|gene_description=cytochrome P450 family 2 subfamily C member 18 | |gene_description=cytochrome P450 family 2 subfamily C member 18 | ||
| − | |gene_name=CYP2C18 | + | |gene_id=1562 |
| + | |gene_name=cytochrome P450 family 2 subfamily C member 18 | ||
| + | |gene_source=HGNC:2620 | ||
| + | |gene_symbol=CYP2C18 | ||
| + | |gene_synonyms=CPCI CYP2C P450IIC17 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2620 | ||
|nearest_ensembl=ENSG00000108242 | |nearest_ensembl=ENSG00000108242 | ||
|nearest_promoter_id=NM_001128925 | |nearest_promoter_id=NM_001128925 | ||
|nearest_refseq=NM_000772 | |nearest_refseq=NM_000772 | ||
|nearest_unigene=Hs.511872 | |nearest_unigene=Hs.511872 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=94683447 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001128925 NM_000772 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106336.1 | |tss_id=hg_106336.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7Z348 | ||
}} | }} | ||
Revision as of 22:14, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001128925 NM_000772 |
|---|---|
| Distance: | 34 |
| Num_trans: | 18 |
| All_trans: | NM_001128925:34 NM_000772:34 ENST00000285979.10:161 uc001kjv.6:161 M61856:161 BC069666:166 ENST00000339022.6:315 uc001kjw.6:315 BC096257:315 BC096258:315 BC096259:315 BC096260:315 M61853:318 AK313403:335 AK223510:335 CU686960:360 HQ447473:360 KJ891015:360 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NM_001128925 |
| Entrez ID: | 1562 |
| Nearest Unigene: | Hs.511872 |
| Nearest Refseq: | NM_000772 |
| Nearest Ensembl: | ENSG00000108242 |
| Gene Name: | cytochrome P450 family 2 subfamily C member 18 |
| Gene Alias: | CPCI |
| Gene Description: | cytochrome P450 family 2 subfamily C member 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
