Difference between revisions of "TSS:Hg 106348.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-1 |entrez_id=1559 |gc_percent=0.447761 |gene_alias=CPC9|CYP2C|CYP2C10|CYPIIC9|P450IIC9 |gene_description=cytochrome P450 famil...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CYP2C= | ||
| + | |CYP2C10= | ||
| + | |CYPIIC9= | ||
| + | |P450IIC9= | ||
| + | |all_trans=ENST00000461906.1:0 NM_000771:0 uc001kjz.4:0 BC020754:0 AK289420:0 AK298458:0 BC070317:0 ENST00000260682.6:7 uc001kka.5:7 M61855:7 M61857:9 BC125054:19 KJ901369:19 KJ891014:19 KR711924:19 KR711925:19 KR711926:19 KR711927:19 D00173:28 M21939:33 M15331:34 S46963:56 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=-1 | |distance_to_tss=-1 | ||
| + | |end=94938664 | ||
|entrez_id=1559 | |entrez_id=1559 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=CPC9|CYP2C|CYP2C10|CYPIIC9|P450IIC9 | |gene_alias=CPC9|CYP2C|CYP2C10|CYPIIC9|P450IIC9 | ||
|gene_description=cytochrome P450 family 2 subfamily C member 9 | |gene_description=cytochrome P450 family 2 subfamily C member 9 | ||
| − | |gene_name=CYP2C9 | + | |gene_id=1559 |
| + | |gene_name=cytochrome P450 family 2 subfamily C member 9 | ||
| + | |gene_source=HGNC:2623 | ||
| + | |gene_symbol=CYP2C9 | ||
| + | |gene_synonyms=P450IIC9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2623 | ||
|nearest_ensembl=ENSG00000138109 | |nearest_ensembl=ENSG00000138109 | ||
|nearest_promoter_id=NM_000771 | |nearest_promoter_id=NM_000771 | ||
|nearest_refseq=NM_000771 | |nearest_refseq=NM_000771 | ||
|nearest_unigene=Hs.282624 | |nearest_unigene=Hs.282624 | ||
| + | |num_trans=22 | ||
| + | |species=human | ||
| + | |start=94938649 | ||
| + | |strand=+ | ||
|tata_box="-33(TGTTATAAAAGG,-,0.00)" | |tata_box="-33(TGTTATAAAAGG,-,0.00)" | ||
| + | |transcript_name=ENST00000461906.1 NM_000771 uc001kjz.4 BC020754 AK289420 AK298458 BC070317 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106348.1 | |tss_id=hg_106348.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DPQ9 S5RV20 | ||
}} | }} | ||
Revision as of 22:14, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000461906.1 NM_000771 uc001kjz.4 BC020754 AK289420 AK298458 BC070317 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000461906.1:0 NM_000771:0 uc001kjz.4:0 BC020754:0 AK289420:0 AK298458:0 BC070317:0 ENST00000260682.6:7 uc001kka.5:7 M61855:7 M61857:9 BC125054:19 KJ901369:19 KJ891014:19 KR711924:19 KR711925:19 KR711926:19 KR711927:19 D00173:28 M21939:33 M15331:34 S46963:56 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_000771 |
| Entrez ID: | 1559 |
| Nearest Unigene: | Hs.282624 |
| Nearest Refseq: | NM_000771 |
| Nearest Ensembl: | ENSG00000138109 |
| Gene Name: | cytochrome P450 family 2 subfamily C member 9 |
| Gene Alias: | CPC9 |
| Gene Description: | cytochrome P450 family 2 subfamily C member 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-33(TGTTATAAAAGG,-,0.00)" |
