Difference between revisions of "TSS:Hg 10635.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=110103 |entrez_id=23352 |gc_percent=0.462687 |gene_alias=RBAF600|ZUBR1|p600 |gene_description=ubiquitin protein ligase E3 compon...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZUBR1= | ||
| + | |all_trans=ENST00000467272.6:17 uc057cvk.1:17 BC096758:-257 BC018694:-288 AK298314:488 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=17 | ||
|distance_to_tss=110103 | |distance_to_tss=110103 | ||
| + | |end=19100156 | ||
|entrez_id=23352 | |entrez_id=23352 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=RBAF600|ZUBR1|p600 | |gene_alias=RBAF600|ZUBR1|p600 | ||
|gene_description=ubiquitin protein ligase E3 component n-recognin 4 | |gene_description=ubiquitin protein ligase E3 component n-recognin 4 | ||
| − | |gene_name=UBR4 | + | |gene_id=23352 |
| + | |gene_name=ubiquitin protein ligase E3 component n-recognin 4 | ||
| + | |gene_source=HGNC:30313 | ||
| + | |gene_symbol=UBR4 | ||
| + | |gene_synonyms=KIAA0462 KIAA1307 RBAF600 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30313 | ||
|nearest_ensembl=ENSG00000127481 | |nearest_ensembl=ENSG00000127481 | ||
|nearest_promoter_id=NM_020765 | |nearest_promoter_id=NM_020765 | ||
|nearest_refseq=NM_020765 | |nearest_refseq=NM_020765 | ||
|nearest_unigene=Hs.148078 | |nearest_unigene=Hs.148078 | ||
| + | |num_trans=5 | ||
| + | |p600= | ||
| + | |species=human | ||
| + | |start=19100142 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000467272.6 uc057cvk.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10635.1 | |tss_id=hg_10635.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000467272.6 uc057cvk.1 |
|---|---|
| Distance: | 17 |
| Num_trans: | 5 |
| All_trans: | ENST00000467272.6:17 uc057cvk.1:17 BC096758:-257 BC018694:-288 AK298314:488 |
TATA-Box annotation
| Distance to TSS: | 110103 |
|---|---|
| Nearest PromoterID: | NM_020765 |
| Entrez ID: | 23352 |
| Nearest Unigene: | Hs.148078 |
| Nearest Refseq: | NM_020765 |
| Nearest Ensembl: | ENSG00000127481 |
| Gene Name: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Alias: | RBAF600 |
| Gene Description: | ubiquitin protein ligase E3 component n-recognin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
