Difference between revisions of "TSS:Hg 106405.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1888 |entrez_id=118788 |gc_percent=0.532338 |gene_alias=BCAP |gene_description=phosphoinositide-3-kinase adaptor protein 1 |gene...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance= | ||
|distance_to_tss=1888 | |distance_to_tss=1888 | ||
| + | |end=96718650 | ||
|entrez_id=118788 | |entrez_id=118788 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_152309 | |nearest_refseq=NM_152309 | ||
|nearest_unigene=Hs.310456 | |nearest_unigene=Hs.310456 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=96718617 | ||
| + | |strand=+ | ||
|tata_box="-49(GCCCATAAATAG,-,0.00),-47(CCATAAATAGCC,+,0.00)" | |tata_box="-49(GCCCATAAATAG,-,0.00),-47(CCATAAATAGCC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_106405.1 | |tss_id=hg_106405.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 22:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1888 |
|---|---|
| Nearest PromoterID: | NM_152309 |
| Entrez ID: | 118788 |
| Nearest Unigene: | Hs.310456 |
| Nearest Refseq: | NM_152309 |
| Nearest Ensembl: | ENSG00000155629 |
| Gene Name: | PIK3AP1 |
| Gene Alias: | BCAP |
| Gene Description: | phosphoinositide-3-kinase adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-49(GCCCATAAATAG,-,0.00),-47(CCATAAATAGCC,+,0.00)" |
