Difference between revisions of "TSS:Hg 106419.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=74 |entrez_id=84458 |gc_percent=0.726368 |gene_alias=C10orf12|MLR2 |gene_description=ligand dependent nuclear receptor corepress...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MLR2= | ||
| + | |all_trans=AB058698:3 ENST00000371097.8:-40 uc057vde.1:-40 AL834245:-40 ENST00000356016.7:-65 NM_032440:-65 uc001kmu.3:-65 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=3 | ||
|distance_to_tss=74 | |distance_to_tss=74 | ||
| + | |end=96833039 | ||
|entrez_id=84458 | |entrez_id=84458 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=C10orf12|MLR2 | |gene_alias=C10orf12|MLR2 | ||
|gene_description=ligand dependent nuclear receptor corepressor | |gene_description=ligand dependent nuclear receptor corepressor | ||
| − | |gene_name=LCOR | + | |gene_id=84458 |
| + | |gene_name=ligand dependent nuclear receptor corepressor | ||
| + | |gene_source=HGNC:29503 | ||
| + | |gene_symbol=LCOR | ||
| + | |gene_synonyms=FLJ38026 KIAA1795 MLR2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29503 | ||
|nearest_ensembl=ENSG00000196233 | |nearest_ensembl=ENSG00000196233 | ||
|nearest_promoter_id=NM_032440 | |nearest_promoter_id=NM_032440 | ||
|nearest_refseq=NM_015652 | |nearest_refseq=NM_015652 | ||
|nearest_unigene=Hs.427927 | |nearest_unigene=Hs.427927 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=96833019 | ||
| + | |strand=+ | ||
| + | |transcript_name=AB058698 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106419.1 | |tss_id=hg_106419.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB058698 |
|---|---|
| Distance: | 3 |
| Num_trans: | 7 |
| All_trans: | AB058698:3 ENST00000371097.8:-40 uc057vde.1:-40 AL834245:-40 ENST00000356016.7:-65 NM_032440:-65 uc001kmu.3:-65 |
TATA-Box annotation
| Distance to TSS: | 74 |
|---|---|
| Nearest PromoterID: | NM_032440 |
| Entrez ID: | 84458 |
| Nearest Unigene: | Hs.427927 |
| Nearest Refseq: | NM_015652 |
| Nearest Ensembl: | ENSG00000196233 |
| Gene Name: | ligand dependent nuclear receptor corepressor |
| Gene Alias: | C10orf12 |
| Gene Description: | ligand dependent nuclear receptor corepressor |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
