Difference between revisions of "TSS:Hg 106433.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=92 |entrez_id=5223 |gc_percent=0.706468 |gene_alias=HEL-S-35|PGAM-B|PGAMA |gene_description=phosphoglycerate mutase 1 |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PGAM-B= | ||
| + | |PGAMA= | ||
| + | |all_trans=AK292216:0 ENST00000334828.5:-45 uc001knh.4:-45 AK125057:50 ENST00000473929.1:63 uc057vel.1:63 NM_002629:-80 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=0 | ||
|distance_to_tss=92 | |distance_to_tss=92 | ||
| + | |end=97426230 | ||
|entrez_id=5223 | |entrez_id=5223 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=HEL-S-35|PGAM-B|PGAMA | |gene_alias=HEL-S-35|PGAM-B|PGAMA | ||
|gene_description=phosphoglycerate mutase 1 | |gene_description=phosphoglycerate mutase 1 | ||
| − | |gene_name=PGAM1 | + | |gene_id=5223 |
| + | |gene_name=phosphoglycerate mutase 1 | ||
| + | |gene_source=HGNC:8888 | ||
| + | |gene_symbol=PGAM1 | ||
| + | |gene_synonyms=PGAM-B | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8888 | ||
|nearest_ensembl=ENSG00000171314 | |nearest_ensembl=ENSG00000171314 | ||
|nearest_promoter_id=NM_002629 | |nearest_promoter_id=NM_002629 | ||
|nearest_refseq=NM_002629 | |nearest_refseq=NM_002629 | ||
|nearest_unigene=Hs.632918 | |nearest_unigene=Hs.632918 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=97426204 | ||
| + | |strand=+ | ||
| + | |transcript_name=AK292216 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106433.1 | |tss_id=hg_106433.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK292216 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | AK292216:0 ENST00000334828.5:-45 uc001knh.4:-45 AK125057:50 ENST00000473929.1:63 uc057vel.1:63 NM_002629:-80 |
TATA-Box annotation
| Distance to TSS: | 92 |
|---|---|
| Nearest PromoterID: | NM_002629 |
| Entrez ID: | 5223 |
| Nearest Unigene: | Hs.632918 |
| Nearest Refseq: | NM_002629 |
| Nearest Ensembl: | ENSG00000171314 |
| Gene Name: | phosphoglycerate mutase 1 |
| Gene Alias: | HEL-S-35 |
| Gene Description: | phosphoglycerate mutase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
