Difference between revisions of "TSS:Hg 106445.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=338 |entrez_id=26287 |gc_percent=0.661692 |gene_alias=ARPP |gene_description=ankyrin repeat domain 2 |gene_name=ANKRD2 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000455090.1:0 uc057vga.1:0 AK314763:0 AJ304805:0 BC020817:0 AB058599:0 KJ898619:-66 AJ249975:69 BC107759:-231 ENST00000307518.9:-274 ENST00000298808.9:-274 ENST00000370655.5:-274 uc009xvu.5:-274 uc001knw.5:-274 uc057vfz.1:-274 AK056990:-274 NM_020349:-332 NM_001129981:-332 NM_001291219:-332 NM_001291218:-332 AJ583444:-332 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=0 | ||
|distance_to_tss=338 | |distance_to_tss=338 | ||
| + | |end=97572786 | ||
|entrez_id=26287 | |entrez_id=26287 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=ARPP | |gene_alias=ARPP | ||
|gene_description=ankyrin repeat domain 2 | |gene_description=ankyrin repeat domain 2 | ||
| − | |gene_name=ANKRD2 | + | |gene_id=26287 |
| + | |gene_name=ankyrin repeat domain 2 | ||
| + | |gene_source=HGNC:495 | ||
| + | |gene_symbol=ANKRD2 | ||
| + | |gene_synonyms=ARPP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:495 | ||
|nearest_ensembl=ENSG00000165887 | |nearest_ensembl=ENSG00000165887 | ||
|nearest_promoter_id=NM_020349 | |nearest_promoter_id=NM_020349 | ||
|nearest_refseq=NM_020349 | |nearest_refseq=NM_020349 | ||
|nearest_unigene=Hs.73708 | |nearest_unigene=Hs.73708 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=97572772 | ||
| + | |strand=+ | ||
|tata_box="-32(GCCTATAAAGCC,+,0.00)" | |tata_box="-32(GCCTATAAAGCC,+,0.00)" | ||
| + | |transcript_name=ENST00000455090.1 uc057vga.1 AK314763 AJ304805 BC020817 AB058599 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106445.1 | |tss_id=hg_106445.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B2RBQ4 Q5T457 | ||
}} | }} | ||
Revision as of 22:18, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000455090.1 uc057vga.1 AK314763 AJ304805 BC020817 AB058599 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000455090.1:0 uc057vga.1:0 AK314763:0 AJ304805:0 BC020817:0 AB058599:0 KJ898619:-66 AJ249975:69 BC107759:-231 ENST00000307518.9:-274 ENST00000298808.9:-274 ENST00000370655.5:-274 uc009xvu.5:-274 uc001knw.5:-274 uc057vfz.1:-274 AK056990:-274 NM_020349:-332 NM_001129981:-332 NM_001291219:-332 NM_001291218:-332 AJ583444:-332 |
TATA-Box annotation
| Distance to TSS: | 338 |
|---|---|
| Nearest PromoterID: | NM_020349 |
| Entrez ID: | 26287 |
| Nearest Unigene: | Hs.73708 |
| Nearest Refseq: | NM_020349 |
| Nearest Ensembl: | ENSG00000165887 |
| Gene Name: | ankyrin repeat domain 2 |
| Gene Alias: | ARPP |
| Gene Description: | ankyrin repeat domain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(GCCTATAAAGCC,+,0.00)" |
