Difference between revisions of "TSS:Hg 106449.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-18 |entrez_id=112817 |gc_percent=0.587065 |gene_alias=C10orf65|DHDPS2|DHDPSL|HP3|NPL2 |gene_description=4-hydroxy-2-oxoglutarat...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DHDPS2= | ||
| + | |DHDPSL= | ||
| + | |HP3= | ||
| + | |NPL2= | ||
| + | |all_trans=ENST00000465608.1:0 uc001knx.3:0 AK094791:0 ENST00000370647.8:4 ENST00000370646.8:4 uc001kny.4:4 uc001knz.4:4 NM_001134670:6 NM_138413:6 BC011916:6 BC045550:25 BC057821:32 ENST00000370649.3:35 uc010qoy.2:35 AK293733:35 AK289440:339 CU692268:365 EU831694:365 EU831704:365 EU831607:365 EU831618:365 CU691258:365 HQ448020:365 KJ899986:365 KJ906404:365 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=-18 | |distance_to_tss=-18 | ||
| + | |end=97584339 | ||
|entrez_id=112817 | |entrez_id=112817 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=C10orf65|DHDPS2|DHDPSL|HP3|NPL2 | |gene_alias=C10orf65|DHDPS2|DHDPSL|HP3|NPL2 | ||
|gene_description=4-hydroxy-2-oxoglutarate aldolase 1 | |gene_description=4-hydroxy-2-oxoglutarate aldolase 1 | ||
| − | |gene_name=HOGA1 | + | |gene_id=112817 |
| + | |gene_name=4-hydroxy-2-oxoglutarate aldolase 1 | ||
| + | |gene_source=HGNC:25155 | ||
| + | |gene_symbol=HOGA1 | ||
| + | |gene_synonyms=DHDPS2 FLJ37472 NPL2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25155 | ||
|nearest_ensembl=ENSG00000241935 | |nearest_ensembl=ENSG00000241935 | ||
|nearest_promoter_id=NM_001134670 | |nearest_promoter_id=NM_001134670 | ||
|nearest_refseq=NM_138413 | |nearest_refseq=NM_138413 | ||
|nearest_unigene=Hs.180346 | |nearest_unigene=Hs.180346 | ||
| + | |num_trans=25 | ||
| + | |species=human | ||
| + | |start=97584314 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000465608.1 uc001knx.3 AK094791 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106449.1 | |tss_id=hg_106449.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:19, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000465608.1 uc001knx.3 AK094791 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000465608.1:0 uc001knx.3:0 AK094791:0 ENST00000370647.8:4 ENST00000370646.8:4 uc001kny.4:4 uc001knz.4:4 NM_001134670:6 NM_138413:6 BC011916:6 BC045550:25 BC057821:32 ENST00000370649.3:35 uc010qoy.2:35 AK293733:35 AK289440:339 CU692268:365 EU831694:365 EU831704:365 EU831607:365 EU831618:365 CU691258:365 HQ448020:365 KJ899986:365 KJ906404:365 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_001134670 |
| Entrez ID: | 112817 |
| Nearest Unigene: | Hs.180346 |
| Nearest Refseq: | NM_138413 |
| Nearest Ensembl: | ENSG00000241935 |
| Gene Name: | 4-hydroxy-2-oxoglutarate aldolase 1 |
| Gene Alias: | C10orf65 |
| Gene Description: | 4-hydroxy-2-oxoglutarate aldolase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
