Difference between revisions of "TSS:Hg 106451.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=102 |entrez_id=112817 |gc_percent=0.572139 |gene_alias=C10orf65|DHDPS2|DHDPSL|HP3|NPL2 |gene_description=4-hydroxy-2-oxoglutara...") |
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{{TSSDetail | {{TSSDetail | ||
+ | |DHDPS2= | ||
+ | |DHDPSL= | ||
+ | |HP3= | ||
+ | |NPL2= | ||
+ | |all_trans=ENST00000370649.3:-66 uc010qoy.2:-66 AK293733:-66 BC057821:-69 BC045550:-76 NM_001134670:-95 NM_138413:-95 BC011916:-95 ENST00000370647.8:-97 ENST00000370646.8:-97 uc001kny.4:-97 uc001knz.4:-97 ENST00000465608.1:-117 uc001knx.3:-117 AK094791:-117 AK289440:223 CU692268:249 EU831694:249 EU831704:249 EU831607:249 EU831618:249 CU691258:249 HQ448020:249 KJ899986:249 KJ906404:249 | ||
+ | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
+ | |distance=-66 | ||
|distance_to_tss=102 | |distance_to_tss=102 | ||
+ | |end=97584455 | ||
|entrez_id=112817 | |entrez_id=112817 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=C10orf65|DHDPS2|DHDPSL|HP3|NPL2 | |gene_alias=C10orf65|DHDPS2|DHDPSL|HP3|NPL2 | ||
|gene_description=4-hydroxy-2-oxoglutarate aldolase 1 | |gene_description=4-hydroxy-2-oxoglutarate aldolase 1 | ||
− | |gene_name= | + | |gene_id=55361 |
+ | |gene_name=phosphatidylinositol 4-kinase type 2 alpha | ||
+ | |gene_source=HGNC:30031 | ||
+ | |gene_symbol=PI4K2A | ||
+ | |gene_synonyms=DKFZP761G1923 PI4KII PIK42A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
+ | |hgnc_mgi_id=HGNC:30031 | ||
|nearest_ensembl=ENSG00000241935 | |nearest_ensembl=ENSG00000241935 | ||
|nearest_promoter_id=NM_138413 | |nearest_promoter_id=NM_138413 | ||
|nearest_refseq=NM_138413 | |nearest_refseq=NM_138413 | ||
|nearest_unigene=Hs.180346 | |nearest_unigene=Hs.180346 | ||
+ | |num_trans=25 | ||
+ | |species=human | ||
+ | |start=97584439 | ||
+ | |strand=+ | ||
+ | |transcript_name=ENST00000370649.3 uc010qoy.2 AK293733 | ||
+ | |tss_classification=yes | ||
|tss_id=hg_106451.1 | |tss_id=hg_106451.1 | ||
+ | |tss_score=1 | ||
+ | |uniprot_id=E9PAM4 | ||
}} | }} |
Revision as of 22:19, 8 March 2018
Basic information about the TSS
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Start of the center position in the TSS region: | |
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End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000370649.3 uc010qoy.2 AK293733 |
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Distance: | -66 |
Num_trans: | 25 |
All_trans: | ENST00000370649.3:-66 uc010qoy.2:-66 AK293733:-66 BC057821:-69 BC045550:-76 NM_001134670:-95 NM_138413:-95 BC011916:-95 ENST00000370647.8:-97 ENST00000370646.8:-97 uc001kny.4:-97 uc001knz.4:-97 ENST00000465608.1:-117 uc001knx.3:-117 AK094791:-117 AK289440:223 CU692268:249 EU831694:249 EU831704:249 EU831607:249 EU831618:249 CU691258:249 HQ448020:249 KJ899986:249 KJ906404:249 |
TATA-Box annotation
Distance to TSS: | 102 |
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Nearest PromoterID: | NM_138413 |
Entrez ID: | 112817 |
Nearest Unigene: | Hs.180346 |
Nearest Refseq: | NM_138413 |
Nearest Ensembl: | ENSG00000241935 |
Gene Name: | phosphatidylinositol 4-kinase type 2 alpha |
Gene Alias: | C10orf65 |
Gene Description: | 4-hydroxy-2-oxoglutarate aldolase 1 |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.572139 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |