Difference between revisions of "TSS:Hg 106477.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-68 |entrez_id=100505561 |gc_percent=0.81592 |gene_alias=- |gene_description=long intergenic non-protein coding RNA 866 |gene_na...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001010917:331 BC110810:331 ENST00000370602.5:332 uc001kos.4:332 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=331 | ||
|distance_to_tss=-68 | |distance_to_tss=-68 | ||
| + | |end=97849907 | ||
|entrez_id=100505561 | |entrez_id=100505561 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 866 | |gene_description=long intergenic non-protein coding RNA 866 | ||
| − | |gene_name= | + | |gene_id=401647 |
| + | |gene_name=golgin A7 family member B | ||
| + | |gene_source=HGNC:31668 | ||
| + | |gene_symbol=GOLGA7B | ||
| + | |gene_synonyms=bA451M19.3 bA459F3.4 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31668 | ||
|nearest_ensembl=ENSG00000227356 | |nearest_ensembl=ENSG00000227356 | ||
|nearest_promoter_id=NR_108035 | |nearest_promoter_id=NR_108035 | ||
|nearest_refseq=NR_108035 | |nearest_refseq=NR_108035 | ||
|nearest_unigene=Hs.351904 | |nearest_unigene=Hs.351904 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=97849825 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001010917 BC110810 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106477.1 | |tss_id=hg_106477.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6ZUQ1 | ||
}} | }} | ||
Revision as of 22:20, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001010917 BC110810 |
|---|---|
| Distance: | 331 |
| Num_trans: | 4 |
| All_trans: | NM_001010917:331 BC110810:331 ENST00000370602.5:332 uc001kos.4:332 |
TATA-Box annotation
| Distance to TSS: | -68 |
|---|---|
| Nearest PromoterID: | NR_108035 |
| Entrez ID: | 100505561 |
| Nearest Unigene: | Hs.351904 |
| Nearest Refseq: | NR_108035 |
| Nearest Ensembl: | ENSG00000227356 |
| Gene Name: | golgin A7 family member B |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 866 |
| Gene Type: | ncRNA |
| CpG%: | 0.12 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
