Difference between revisions of "TSS:Hg 106631.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=-35 |entrez_id=84445 |gc_percent=0.860697 |gene_alias=LAPSER1 |gene_description=leucine zipper tumor suppressor 2 |gene_name=LZ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001318100:30 BC058938:67 ENST00000454422.1:69 uc057vlv.1:69 ENST00000370220.1:-298 uc001ksk.3:-298 AB058716:-298 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| + | |distance=30 | ||
|distance_to_tss=-35 | |distance_to_tss=-35 | ||
| + | |end=100999784 | ||
|entrez_id=84445 | |entrez_id=84445 | ||
|gc_percent=0.860697 | |gc_percent=0.860697 | ||
|gene_alias=LAPSER1 | |gene_alias=LAPSER1 | ||
|gene_description=leucine zipper tumor suppressor 2 | |gene_description=leucine zipper tumor suppressor 2 | ||
| − | |gene_name=LZTS2 | + | |gene_id=84445 |
| + | |gene_name="leucine zipper, putative tumor suppressor 2" | ||
| + | |gene_source=HGNC:29381 | ||
| + | |gene_symbol=LZTS2 | ||
| + | |gene_synonyms=KIAA1813 LAPSER1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29381 | ||
|nearest_ensembl=ENSG00000107816 | |nearest_ensembl=ENSG00000107816 | ||
|nearest_promoter_id=NM_001318100 | |nearest_promoter_id=NM_001318100 | ||
|nearest_refseq=NM_032429 | |nearest_refseq=NM_032429 | ||
|nearest_unigene=Hs.523221 | |nearest_unigene=Hs.523221 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=100999773 | ||
| + | |strand=+ | ||
| + | |transcript_name=NM_001318100 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106631.1 | |tss_id=hg_106631.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9BRK4 | ||
}} | }} | ||
Revision as of 22:26, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001318100 |
|---|---|
| Distance: | 30 |
| Num_trans: | 7 |
| All_trans: | NM_001318100:30 BC058938:67 ENST00000454422.1:69 uc057vlv.1:69 ENST00000370220.1:-298 uc001ksk.3:-298 AB058716:-298 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_001318100 |
| Entrez ID: | 84445 |
| Nearest Unigene: | Hs.523221 |
| Nearest Refseq: | NM_032429 |
| Nearest Ensembl: | ENSG00000107816 |
| Gene Name: | "leucine zipper, putative tumor suppressor 2" |
| Gene Alias: | LAPSER1 |
| Gene Description: | leucine zipper tumor suppressor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.860697 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
