Difference between revisions of "TSS:Hg 107729.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=16 |entrez_id=3632 |gc_percent=0.800995 |gene_alias=5PTASE |gene_description=inositol polyphosphate-5-phosphatase A |gene_name=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000368594.7:8 uc001llp.4:8 BC096280:16 BC096281:16 BC117515:16 ENST00000368593.7:37 NM_005539:37 uc001llo.1:37 AF273055:37 X77567:191 KJ891481:279 AB527555:283 ENST00000423490.5:327 uc057wxo.1:327 Z31695:331 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=8 | ||
|distance_to_tss=16 | |distance_to_tss=16 | ||
| + | |end=132537812 | ||
|entrez_id=3632 | |entrez_id=3632 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
|gene_alias=5PTASE | |gene_alias=5PTASE | ||
|gene_description=inositol polyphosphate-5-phosphatase A | |gene_description=inositol polyphosphate-5-phosphatase A | ||
| − | |gene_name=INPP5A | + | |gene_id=3632 |
| + | |gene_name=inositol polyphosphate-5-phosphatase A | ||
| + | |gene_source=HGNC:6076 | ||
| + | |gene_symbol=INPP5A | ||
| + | |gene_synonyms=5PTASE | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:6076 | ||
|nearest_ensembl=ENSG00000068383 | |nearest_ensembl=ENSG00000068383 | ||
|nearest_promoter_id=NM_005539 | |nearest_promoter_id=NM_005539 | ||
|nearest_refseq=NM_005539 | |nearest_refseq=NM_005539 | ||
|nearest_unigene=Hs.523360 | |nearest_unigene=Hs.523360 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=132537778 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000368594.7 uc001llp.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107729.1 | |tss_id=hg_107729.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q14642 | ||
}} | }} | ||
Revision as of 23:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000368594.7 uc001llp.4 |
|---|---|
| Distance: | 8 |
| Num_trans: | 15 |
| All_trans: | ENST00000368594.7:8 uc001llp.4:8 BC096280:16 BC096281:16 BC117515:16 ENST00000368593.7:37 NM_005539:37 uc001llo.1:37 AF273055:37 X77567:191 KJ891481:279 AB527555:283 ENST00000423490.5:327 uc057wxo.1:327 Z31695:331 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_005539 |
| Entrez ID: | 3632 |
| Nearest Unigene: | Hs.523360 |
| Nearest Refseq: | NM_005539 |
| Nearest Ensembl: | ENSG00000068383 |
| Gene Name: | inositol polyphosphate-5-phosphatase A |
| Gene Alias: | 5PTASE |
| Gene Description: | inositol polyphosphate-5-phosphatase A |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
