Difference between revisions of "TSS:Hg 107803.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=131 |entrez_id=92170 |gc_percent=0.741294 |gene_alias=GTP|GTPBP7 |gene_description=mitochondrial ribosome associated GTPase 1 |...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GTPBP7= | ||
| + | |all_trans=BC026725:-6 ENST00000498790.5:-20 uc057wzw.1:-20 ENST00000473735.1:21 uc057wzx.1:21 AK292515:23 EU831508:-25 EU831415:-25 ENST00000495014.5:-30 uc057wzv.1:-30 BC035721:-31 AK293988:-35 ENST00000460848.5:-48 uc057wzu.1:-48 AK074976:-48 ENST00000432508.3:-70 uc057wzt.1:-70 ENST00000317502.10:-73 uc001lnd.4:-73 BC004409:-73 AK308997:-76 BC026039:-103 AK125012:103 NM_138384:-127 ENST00000477902.6:-150 uc057wzs.1:-150 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-6 | ||
|distance_to_tss=131 | |distance_to_tss=131 | ||
| + | |end=133394252 | ||
|entrez_id=92170 | |entrez_id=92170 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=GTP|GTPBP7 | |gene_alias=GTP|GTPBP7 | ||
|gene_description=mitochondrial ribosome associated GTPase 1 | |gene_description=mitochondrial ribosome associated GTPase 1 | ||
| − | |gene_name=MTG1 | + | |gene_id=92170 |
| + | |gene_name=mitochondrial ribosome-associated GTPase 1 | ||
| + | |gene_source=HGNC:32159 | ||
| + | |gene_symbol=MTG1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:32159 | ||
|nearest_ensembl=ENSG00000148824 | |nearest_ensembl=ENSG00000148824 | ||
|nearest_promoter_id=NM_138384 | |nearest_promoter_id=NM_138384 | ||
|nearest_refseq=NM_138384 | |nearest_refseq=NM_138384 | ||
|nearest_unigene=Hs.501578 | |nearest_unigene=Hs.501578 | ||
| + | |num_trans=26 | ||
| + | |species=human | ||
| + | |start=133394243 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC026725 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107803.1 | |tss_id=hg_107803.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 23:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC026725 |
|---|---|
| Distance: | -6 |
| Num_trans: | 26 |
| All_trans: | BC026725:-6 ENST00000498790.5:-20 uc057wzw.1:-20 ENST00000473735.1:21 uc057wzx.1:21 AK292515:23 EU831508:-25 EU831415:-25 ENST00000495014.5:-30 uc057wzv.1:-30 BC035721:-31 AK293988:-35 ENST00000460848.5:-48 uc057wzu.1:-48 AK074976:-48 ENST00000432508.3:-70 uc057wzt.1:-70 ENST00000317502.10:-73 uc001lnd.4:-73 BC004409:-73 AK308997:-76 BC026039:-103 AK125012:103 NM_138384:-127 ENST00000477902.6:-150 uc057wzs.1:-150 |
TATA-Box annotation
| Distance to TSS: | 131 |
|---|---|
| Nearest PromoterID: | NM_138384 |
| Entrez ID: | 92170 |
| Nearest Unigene: | Hs.501578 |
| Nearest Refseq: | NM_138384 |
| Nearest Ensembl: | ENSG00000148824 |
| Gene Name: | mitochondrial ribosome-associated GTPase 1 |
| Gene Alias: | GTP |
| Gene Description: | mitochondrial ribosome associated GTPase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
