Difference between revisions of "TSS:Hg 110128.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=241 |entrez_id=26985 |gc_percent=0.636816 |gene_alias=- |gene_description=adaptor related protein complex 3 mu 1 subunit |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000487653.1:-200 uc057uex.1:-200 BC067127:-204 NM_001320264:-234 AK315597:-237 AK026983:-263 AK299352:-279 ENST00000372745.1:-285 uc001jwg.4:-285 BC026232:-285 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=-200 | ||
|distance_to_tss=241 | |distance_to_tss=241 | ||
| + | |end=74150557 | ||
|entrez_id=26985 | |entrez_id=26985 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=adaptor related protein complex 3 mu 1 subunit | |gene_description=adaptor related protein complex 3 mu 1 subunit | ||
| − | |gene_name=AP3M1 | + | |gene_id=26985 |
| + | |gene_name=adaptor related protein complex 3 mu 1 subunit | ||
| + | |gene_source=HGNC:569 | ||
| + | |gene_symbol=AP3M1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:569 | ||
|nearest_ensembl=ENSG00000185009 | |nearest_ensembl=ENSG00000185009 | ||
|nearest_promoter_id=NM_001320264 | |nearest_promoter_id=NM_001320264 | ||
|nearest_refseq=NM_012095 | |nearest_refseq=NM_012095 | ||
|nearest_unigene=Hs.500104 | |nearest_unigene=Hs.500104 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=74150543 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000487653.1 uc057uex.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_110128.1 | |tss_id=hg_110128.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 00:56, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000487653.1 uc057uex.1 |
|---|---|
| Distance: | -200 |
| Num_trans: | 10 |
| All_trans: | ENST00000487653.1:-200 uc057uex.1:-200 BC067127:-204 NM_001320264:-234 AK315597:-237 AK026983:-263 AK299352:-279 ENST00000372745.1:-285 uc001jwg.4:-285 BC026232:-285 |
TATA-Box annotation
| Distance to TSS: | 241 |
|---|---|
| Nearest PromoterID: | NM_001320264 |
| Entrez ID: | 26985 |
| Nearest Unigene: | Hs.500104 |
| Nearest Refseq: | NM_012095 |
| Nearest Ensembl: | ENSG00000185009 |
| Gene Name: | adaptor related protein complex 3 mu 1 subunit |
| Gene Alias: | - |
| Gene Description: | adaptor related protein complex 3 mu 1 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
