Difference between revisions of "TSS:Hg 110129.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=-25 |entrez_id=26985 |gc_percent=0.552239 |gene_alias=- |gene_description=adaptor related protein complex 3 mu 1 subunit |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000372745.1:0 NM_001320264:0 uc001jwg.4:0 AK026983:0 BC026232:0 AK299352:0 AK315597:0 BC067127:21 ENST00000487653.1:25 uc057uex.1:25 ENST00000355264.8:-212 uc001jwh.4:-212 NM_001320263:-234 NM_001320265:-234 NM_012095:-234 NM_207012:-234 NR_135191:-234 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=-25 | |distance_to_tss=-25 | ||
| + | |end=74150851 | ||
|entrez_id=26985 | |entrez_id=26985 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=adaptor related protein complex 3 mu 1 subunit | |gene_description=adaptor related protein complex 3 mu 1 subunit | ||
| − | |gene_name=AP3M1 | + | |gene_id=26985 |
| + | |gene_name=adaptor related protein complex 3 mu 1 subunit | ||
| + | |gene_source=HGNC:569 | ||
| + | |gene_symbol=AP3M1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:569 | ||
|nearest_ensembl=ENSG00000185009 | |nearest_ensembl=ENSG00000185009 | ||
|nearest_promoter_id=NM_001320264 | |nearest_promoter_id=NM_001320264 | ||
|nearest_refseq=NM_012095 | |nearest_refseq=NM_012095 | ||
|nearest_unigene=Hs.500104 | |nearest_unigene=Hs.500104 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=74150781 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000372745.1 NM_001320264 uc001jwg.4 AK026983 BC026232 AK299352 AK315597 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_110129.1 | |tss_id=hg_110129.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024QZR5 B4DRN6 Q9Y2T2 | ||
}} | }} | ||
Revision as of 00:56, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372745.1 NM_001320264 uc001jwg.4 AK026983 BC026232 AK299352 AK315597 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000372745.1:0 NM_001320264:0 uc001jwg.4:0 AK026983:0 BC026232:0 AK299352:0 AK315597:0 BC067127:21 ENST00000487653.1:25 uc057uex.1:25 ENST00000355264.8:-212 uc001jwh.4:-212 NM_001320263:-234 NM_001320265:-234 NM_012095:-234 NM_207012:-234 NR_135191:-234 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NM_001320264 |
| Entrez ID: | 26985 |
| Nearest Unigene: | Hs.500104 |
| Nearest Refseq: | NM_012095 |
| Nearest Ensembl: | ENSG00000185009 |
| Gene Name: | adaptor related protein complex 3 mu 1 subunit |
| Gene Alias: | - |
| Gene Description: | adaptor related protein complex 3 mu 1 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
