Difference between revisions of "TSS:Hg 110130.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.04 |distance_to_tss=46 |entrez_id=26985 |gc_percent=0.527363 |gene_alias=- |gene_description=adaptor related protein complex 3 mu 1 subunit |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000355264.8:-17 uc001jwh.4:-17 NM_001320263:-39 NM_001320265:-39 NM_012095:-39 NM_207012:-39 NR_135191:-39 ENST00000372745.1:190 uc001jwg.4:190 BC026232:190 AK299352:196 AK026983:212 AK315597:238 NM_001320264:241 BC067127:271 ENST00000487653.1:275 uc057uex.1:275 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| + | |distance=-17 | ||
|distance_to_tss=46 | |distance_to_tss=46 | ||
| + | |end=74151046 | ||
|entrez_id=26985 | |entrez_id=26985 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=adaptor related protein complex 3 mu 1 subunit | |gene_description=adaptor related protein complex 3 mu 1 subunit | ||
| − | |gene_name=AP3M1 | + | |gene_id=26985 |
| + | |gene_name=adaptor related protein complex 3 mu 1 subunit | ||
| + | |gene_source=HGNC:569 | ||
| + | |gene_symbol=AP3M1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:569 | ||
|nearest_ensembl=ENSG00000185009 | |nearest_ensembl=ENSG00000185009 | ||
|nearest_promoter_id=NM_012095 | |nearest_promoter_id=NM_012095 | ||
|nearest_refseq=NM_012095 | |nearest_refseq=NM_012095 | ||
|nearest_unigene=Hs.500104 | |nearest_unigene=Hs.500104 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=74151031 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000355264.8 uc001jwh.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_110130.1 | |tss_id=hg_110130.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024QZR5 Q9Y2T2 | ||
}} | }} | ||
Revision as of 00:56, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000355264.8 uc001jwh.4 |
|---|---|
| Distance: | -17 |
| Num_trans: | 17 |
| All_trans: | ENST00000355264.8:-17 uc001jwh.4:-17 NM_001320263:-39 NM_001320265:-39 NM_012095:-39 NM_207012:-39 NR_135191:-39 ENST00000372745.1:190 uc001jwg.4:190 BC026232:190 AK299352:196 AK026983:212 AK315597:238 NM_001320264:241 BC067127:271 ENST00000487653.1:275 uc057uex.1:275 |
TATA-Box annotation
| Distance to TSS: | 46 |
|---|---|
| Nearest PromoterID: | NM_012095 |
| Entrez ID: | 26985 |
| Nearest Unigene: | Hs.500104 |
| Nearest Refseq: | NM_012095 |
| Nearest Ensembl: | ENSG00000185009 |
| Gene Name: | adaptor related protein complex 3 mu 1 subunit |
| Gene Alias: | - |
| Gene Description: | adaptor related protein complex 3 mu 1 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
