Difference between revisions of "TSS:Hg 111667.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=495 |entrez_id=641451 |gc_percent=0.452736 |gene_alias=ACA19 |gene_description="small nucleolar RNA, H/ACA box 19" |gene_name=S...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000462527.2:-233 uc057whj.1:-233 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-233 | ||
|distance_to_tss=495 | |distance_to_tss=495 | ||
| + | |end=119059657 | ||
|entrez_id=641451 | |entrez_id=641451 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
|gene_alias=ACA19 | |gene_alias=ACA19 | ||
|gene_description="small nucleolar RNA, H/ACA box 19" | |gene_description="small nucleolar RNA, H/ACA box 19" | ||
| − | |gene_name= | + | |gene_id=8661 |
| + | |gene_name=eukaryotic translation initiation factor 3 subunit A | ||
| + | |gene_source=HGNC:3271 | ||
| + | |gene_symbol=EIF3A | ||
| + | |gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta eIF3a | ||
|gene_type=snoRNA | |gene_type=snoRNA | ||
| + | |hgnc_mgi_id=HGNC:3271 | ||
|nearest_ensembl=ENSG00000207468 | |nearest_ensembl=ENSG00000207468 | ||
|nearest_promoter_id=NR_002917 | |nearest_promoter_id=NR_002917 | ||
|nearest_refseq=NR_002917 | |nearest_refseq=NR_002917 | ||
|nearest_unigene=Hs.688653 | |nearest_unigene=Hs.688653 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=119059629 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000462527.2 uc057whj.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_111667.1 | |tss_id=hg_111667.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 02:02, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000462527.2 uc057whj.1 |
|---|---|
| Distance: | -233 |
| Num_trans: | 2 |
| All_trans: | ENST00000462527.2:-233 uc057whj.1:-233 |
TATA-Box annotation
| Distance to TSS: | 495 |
|---|---|
| Nearest PromoterID: | NR_002917 |
| Entrez ID: | 641451 |
| Nearest Unigene: | Hs.688653 |
| Nearest Refseq: | NR_002917 |
| Nearest Ensembl: | ENSG00000207468 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | ACA19 |
| Gene Description: | "small nucleolar RNA, H/ACA box 19" |
| Gene Type: | snoRNA |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
