Difference between revisions of "TSS:Hg 111672.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=10 |entrez_id=8661 |gc_percent=0.736318 |gene_alias=EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 |gene_description=eu...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |EIF3S10= | ||
| + | |P167= | ||
| + | |TIF32= | ||
| + | |all_trans=ENST00000369144.7:0 ENST00000541549.2:0 NM_003750:0 uc001ldu.4:0 uc057whi.1:0 D50929:0 JX312508:0 AK309542:0 AK307610:0 BC064926:0 BC107776:0 U78311:9 BC033769:14 BC054342:17 U58046:24 BC114429:68 AB383762:122 AK302575:279 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=0 | ||
|distance_to_tss=10 | |distance_to_tss=10 | ||
| + | |eIF3-p170= | ||
| + | |eIF3-theta= | ||
| + | |end=119080826 | ||
|entrez_id=8661 | |entrez_id=8661 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 | |gene_alias=EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 | ||
|gene_description=eukaryotic translation initiation factor 3 subunit A | |gene_description=eukaryotic translation initiation factor 3 subunit A | ||
| − | |gene_name=EIF3A | + | |gene_id=8661 |
| + | |gene_name=eukaryotic translation initiation factor 3 subunit A | ||
| + | |gene_source=HGNC:3271 | ||
| + | |gene_symbol=EIF3A | ||
| + | |gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta eIF3a | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3271 | ||
|nearest_ensembl=ENSG00000107581 | |nearest_ensembl=ENSG00000107581 | ||
|nearest_promoter_id=NM_003750 | |nearest_promoter_id=NM_003750 | ||
|nearest_refseq=NM_003750 | |nearest_refseq=NM_003750 | ||
|nearest_unigene=Hs.523299 | |nearest_unigene=Hs.523299 | ||
| + | |num_trans=18 | ||
| + | |p180= | ||
| + | |p185= | ||
| + | |species=human | ||
| + | |start=119080797 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000369144.7 ENST00000541549.2 NM_003750 uc001ldu.4 uc057whi.1 D50929 JX312508 AK309542 AK307610 BC064926 BC107776 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111672.1 | |tss_id=hg_111672.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=J9R021 Q14152 Q3B770 Q6P1R0 | ||
}} | }} | ||
Revision as of 02:02, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000369144.7 ENST00000541549.2 NM_003750 uc001ldu.4 uc057whi.1 D50929 JX312508 AK309542 AK307610 BC064926 BC107776 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000369144.7:0 ENST00000541549.2:0 NM_003750:0 uc001ldu.4:0 uc057whi.1:0 D50929:0 JX312508:0 AK309542:0 AK307610:0 BC064926:0 BC107776:0 U78311:9 BC033769:14 BC054342:17 U58046:24 BC114429:68 AB383762:122 AK302575:279 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_003750 |
| Entrez ID: | 8661 |
| Nearest Unigene: | Hs.523299 |
| Nearest Refseq: | NM_003750 |
| Nearest Ensembl: | ENSG00000107581 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | EIF3 |
| Gene Description: | eukaryotic translation initiation factor 3 subunit A |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
