Difference between revisions of "TSS:Hg 111702.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=247 |entrez_id=7073 |gc_percent=0.706468 |gene_alias=TCBP|TIAR |gene_description=TIA1 cytotoxic granule associated RNA binding pr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TIAR= | ||
| + | |all_trans=AK291239:115 ENST00000479729.1:145 uc057wiw.1:145 AK290984:149 ENST00000489822.5:-177 uc057win.1:-177 AL833106:-177 AK290695:-195 ENST00000497671.5:-242 NM_001033925:-242 NM_003252:-242 uc057wio.1:-242 BC030025:-242 ENST00000436547.6:267 uc001lei.2:267 M96954:267 ENST00000369093.6:282 uc001lej.2:282 AK295243:303 AY633610:304 AB527493:310 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=115 | ||
|distance_to_tss=247 | |distance_to_tss=247 | ||
| + | |end=119596787 | ||
|entrez_id=7073 | |entrez_id=7073 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=TCBP|TIAR | |gene_alias=TCBP|TIAR | ||
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | |gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
| − | |gene_name=TIAL1 | + | |gene_id=7073 |
| + | |gene_name=TIA1 cytotoxic granule-associated RNA binding protein-like 1 | ||
| + | |gene_source=HGNC:11804 | ||
| + | |gene_symbol=TIAL1 | ||
| + | |gene_synonyms=TIAR | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11804 | ||
|nearest_ensembl=ENSG00000151923 | |nearest_ensembl=ENSG00000151923 | ||
|nearest_promoter_id=NM_001323964 | |nearest_promoter_id=NM_001323964 | ||
|nearest_refseq=NM_003252 | |nearest_refseq=NM_003252 | ||
|nearest_unigene=Hs.501203 | |nearest_unigene=Hs.501203 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=119596776 | ||
| + | |strand=- | ||
| + | |transcript_name=AK291239 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111702.1 | |tss_id=hg_111702.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A8K5C4 | ||
}} | }} | ||
Revision as of 02:04, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK291239 |
|---|---|
| Distance: | 115 |
| Num_trans: | 21 |
| All_trans: | AK291239:115 ENST00000479729.1:145 uc057wiw.1:145 AK290984:149 ENST00000489822.5:-177 uc057win.1:-177 AL833106:-177 AK290695:-195 ENST00000497671.5:-242 NM_001033925:-242 NM_003252:-242 uc057wio.1:-242 BC030025:-242 ENST00000436547.6:267 uc001lei.2:267 M96954:267 ENST00000369093.6:282 uc001lej.2:282 AK295243:303 AY633610:304 AB527493:310 |
TATA-Box annotation
| Distance to TSS: | 247 |
|---|---|
| Nearest PromoterID: | NM_001323964 |
| Entrez ID: | 7073 |
| Nearest Unigene: | Hs.501203 |
| Nearest Refseq: | NM_003252 |
| Nearest Ensembl: | ENSG00000151923 |
| Gene Name: | TIA1 cytotoxic granule-associated RNA binding protein-like 1 |
| Gene Alias: | TCBP |
| Gene Description: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
