Difference between revisions of "TSS:Hg 111707.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.095 |distance_to_tss=-330 |entrez_id=7073 |gc_percent=0.666667 |gene_alias=TCBP|TIAR |gene_description=TIA1 cytotoxic granule associated RNA binding...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TIAR= | ||
| + | |all_trans=ENST00000497671.5:327 NM_001033925:327 NM_003252:327 uc057wio.1:327 BC030025:327 AK290695:374 ENST00000489822.5:392 uc057win.1:392 AL833106:392 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| + | |distance=327 | ||
|distance_to_tss=-330 | |distance_to_tss=-330 | ||
| + | |end=119597363 | ||
|entrez_id=7073 | |entrez_id=7073 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=TCBP|TIAR | |gene_alias=TCBP|TIAR | ||
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | |gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
| − | |gene_name=TIAL1 | + | |gene_id=7073 |
| + | |gene_name=TIA1 cytotoxic granule-associated RNA binding protein-like 1 | ||
| + | |gene_source=HGNC:11804 | ||
| + | |gene_symbol=TIAL1 | ||
| + | |gene_synonyms=TIAR | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11804 | ||
|nearest_ensembl=ENSG00000151923 | |nearest_ensembl=ENSG00000151923 | ||
|nearest_promoter_id=NR_136663 | |nearest_promoter_id=NR_136663 | ||
|nearest_refseq=NM_003252 | |nearest_refseq=NM_003252 | ||
|nearest_unigene=Hs.501203 | |nearest_unigene=Hs.501203 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=119597355 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000497671.5 NM_001033925 NM_003252 uc057wio.1 BC030025 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111707.1 | |tss_id=hg_111707.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=E7ETC0 Q49AS9 | ||
}} | }} | ||
Revision as of 02:04, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000497671.5 NM_001033925 NM_003252 uc057wio.1 BC030025 |
|---|---|
| Distance: | 327 |
| Num_trans: | 9 |
| All_trans: | ENST00000497671.5:327 NM_001033925:327 NM_003252:327 uc057wio.1:327 BC030025:327 AK290695:374 ENST00000489822.5:392 uc057win.1:392 AL833106:392 |
TATA-Box annotation
| Distance to TSS: | -330 |
|---|---|
| Nearest PromoterID: | NR_136663 |
| Entrez ID: | 7073 |
| Nearest Unigene: | Hs.501203 |
| Nearest Refseq: | NM_003252 |
| Nearest Ensembl: | ENSG00000151923 |
| Gene Name: | TIA1 cytotoxic granule-associated RNA binding protein-like 1 |
| Gene Alias: | TCBP |
| Gene Description: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
