Difference between revisions of "TSS:Hg 111716.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-3 |entrez_id=6144 |gc_percent=0.427861 |gene_alias=HYPT12|L21 |gene_description=ribosomal protein L21 |gene_name=RPL21 |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |L21= | ||
| + | |all_trans=NM_000982:2 ENST00000495531.1:42 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=2 | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
| + | |end=120355227 | ||
|entrez_id=6144 | |entrez_id=6144 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=HYPT12|L21 | |gene_alias=HYPT12|L21 | ||
|gene_description=ribosomal protein L21 | |gene_description=ribosomal protein L21 | ||
| − | |gene_name=RPL21 | + | |gene_id=6144 |
| + | |gene_name=ribosomal protein L21 | ||
| + | |gene_source=HGNC:10313 | ||
| + | |gene_symbol=RPL21 | ||
| + | |gene_synonyms=DKFZp686C06101 FLJ27458 L21 MGC104274 MGC104275 MGC71252 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10313 | ||
|nearest_ensembl=ENSG00000122026 | |nearest_ensembl=ENSG00000122026 | ||
|nearest_promoter_id=NM_000982 | |nearest_promoter_id=NM_000982 | ||
|nearest_refseq=NM_000982 | |nearest_refseq=NM_000982 | ||
|nearest_unigene=Hs.381123 | |nearest_unigene=Hs.381123 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=120355224 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_000982 | ||
| + | |tss_classification=no | ||
|tss_id=hg_111716.1 | |tss_id=hg_111716.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6IAX2 | ||
}} | }} | ||
Revision as of 02:04, 9 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_000982 |
|---|---|
| Distance: | 2 |
| Num_trans: | 2 |
| All_trans: | NM_000982:2 ENST00000495531.1:42 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_000982 |
| Entrez ID: | 6144 |
| Nearest Unigene: | Hs.381123 |
| Nearest Refseq: | NM_000982 |
| Nearest Ensembl: | ENSG00000122026 |
| Gene Name: | ribosomal protein L21 |
| Gene Alias: | HYPT12 |
| Gene Description: | ribosomal protein L21 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
