Difference between revisions of "TSS:Hg 111884.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=156 |entrez_id=1488 |gc_percent=0.81592 |gene_alias=- |gene_description=C-terminal binding protein 2 |gene_name=CTBP2 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AF016507:-63 BC072020:-83 BC052276:-106 ENST00000494626.6:-107 uc001lif.5:-107 ENST00000337195.9:-121 uc009yal.4:-121 AL833398:-121 BC002486:-122 NM_001329:-142 NM_001290214:-142 ENST00000460976.5:234 uc057wqm.1:234 ENST00000467395.2:422 uc057wqr.1:422 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=-63 | ||
|distance_to_tss=156 | |distance_to_tss=156 | ||
| + | |end=125160392 | ||
|entrez_id=1488 | |entrez_id=1488 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=C-terminal binding protein 2 | |gene_description=C-terminal binding protein 2 | ||
| − | |gene_name=CTBP2 | + | |gene_id=1488 |
| + | |gene_name=C-terminal binding protein 2 | ||
| + | |gene_source=HGNC:2495 | ||
| + | |gene_symbol=CTBP2 | ||
| + | |gene_synonyms=ribeye | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:2495 | ||
|nearest_ensembl=ENSG00000175029 | |nearest_ensembl=ENSG00000175029 | ||
|nearest_promoter_id=NM_001290214 | |nearest_promoter_id=NM_001290214 | ||
|nearest_refseq=NM_001329 | |nearest_refseq=NM_001329 | ||
|nearest_unigene=Hs.501345 | |nearest_unigene=Hs.501345 | ||
| + | |num_trans=15 | ||
| + | |species=human | ||
| + | |start=125160378 | ||
| + | |strand=- | ||
| + | |transcript_name=AF016507 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_111884.1 | |tss_id=hg_111884.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 02:11, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF016507 |
|---|---|
| Distance: | -63 |
| Num_trans: | 15 |
| All_trans: | AF016507:-63 BC072020:-83 BC052276:-106 ENST00000494626.6:-107 uc001lif.5:-107 ENST00000337195.9:-121 uc009yal.4:-121 AL833398:-121 BC002486:-122 NM_001329:-142 NM_001290214:-142 ENST00000460976.5:234 uc057wqm.1:234 ENST00000467395.2:422 uc057wqr.1:422 |
TATA-Box annotation
| Distance to TSS: | 156 |
|---|---|
| Nearest PromoterID: | NM_001290214 |
| Entrez ID: | 1488 |
| Nearest Unigene: | Hs.501345 |
| Nearest Refseq: | NM_001329 |
| Nearest Ensembl: | ENSG00000175029 |
| Gene Name: | C-terminal binding protein 2 |
| Gene Alias: | - |
| Gene Description: | C-terminal binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
